fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50410.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt002429 not found in 253aa AT3G50410.1 not_1st 0.453681710 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G50410.1     MPT--SDSGEPRRIAMKPNGVTVPISD--------QQEQLPCPRCDSSNTKFCYYNNYNF
pt002429_POPTR_ MPTELSSSEKTRR----PPLSTTPTSNKPGGAPPQEQEHLPCPRCDSTNTKFCYYNNYNF
                ***  *.* :.**    *   *.* *:        :**:********:************

AT3G50410.1     SQPRHFCKACRRYWTHGGTLRDVPVGGGTRKSAKRSRTCSNSSSSSVSGVVSNS-NGVPL
pt002429_POPTR_ SQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKNAKRSRTSATTAASFAGPIIDNNIDNLPL
                ********:*************:********.******.:.:::* .. ::.*. :.:**

AT3G50410.1     QTTPVLFPQSSISNGVTHTVTESDGKGS----ALSLCGSFTSTLLNHNAAATATHGSGSV
pt002429_POPTR_ PATPVLVPLTASQGFSVHFGGGSDGKGNGGCGSGALGGSFTS-LLN-------TPGPAGI
                 :****.* :: ..  .*    *****.    : :* ***** ***       * *...:

AT3G50410.1     IGIGGFGIGLGSGFDDVSFGLGRAMWPFSTVGTATTTNVGSN-GGHHAVPMPA----TWQ
pt002429_POPTR_ LALGRFGHGLGHGLEDVGCGLGRGLWSFPGIGDS-----GAGVGGHGGVTVTAGLDNTWQ
                :.:* ** *** *::**. ****.:*.*. :* :     *:. *** .*.:.*    ***

AT3G50410.1     FEGLESNAGGGFVSGEYFAWPDLSITTPGNSLK
pt002429_POPTR_ FGSAGQN---GFVGGDCFSWPELAISTPANGFK
                * .  .*   ***.*: *:**:*:*:**.*.:*
BoxShade v3.31 C (beta, 970507) Output
AT3G50410.1     M P T - - S D S G E P R R I A M K P N G V T V P I S D - - - - - - - - Q Q E Q L P C P R C D S S N T K F C Y Y N N Y N F
pt002429_POPTR_    M P T E L S S S E K T R R - - - - P P L S T T P T S N K P G G A P P Q E Q E H L P C P R C D S T N T K F C Y Y N N Y N F
 
AT3G50410.1     S Q P R H F C K A C R R Y W T H G G T L R D V P V G G G T R K S A K R S R T C S N S S S S S V S G V V S N S - N G V P L
pt002429_POPTR_    S Q P R H F C K S C R R Y W T H G G T L R D I P V G G G T R K N A K R S R T S A T T A A S F A G P I I D N N I D N L P L
 
AT3G50410.1     Q T T P V L F P Q S S I S N G V T H T V T E S D G K G S - - - - A L S L C G S F T S T L L N H N A A A T A T H G S G S V
pt002429_POPTR_    P A T P V L V P L T A S Q G F S V H F G G G S D G K G N G G C G S G A L G G S F T S - L L N - - - - - - - T P G P A G I
 
AT3G50410.1     I G I G G F G I G L G S G F D D V S F G L G R A M W P F S T V G T A T T T N V G S N - G G H H A V P M P A - - - - T W Q
pt002429_POPTR_    L A L G R F G H G L G H G L E D V G C G L G R G L W S F P G I G D S - - - - - G A G V G G H G G V T V T A G L D N T W Q
 
AT3G50410.1     F E G L E S N A G G G F V S G E Y F A W P D L S I T T P G N S L K
pt002429_POPTR_    F G S A G Q N - - - G F V G G D C F S W P E L A I S T P A N G F K
 
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