fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50410.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt036659 not found in 248aa AT3G50410.1 1st_1st 0.489311163 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G50410.1     MPT--SDSGEPRRIAM-------KPNGVTVPISDQQEQLPCPRCDSSNTKFCYYNNYNFS
pt036659_POPTR_ MPAELSSSEAARRAQQSTAATLTKPGGAP---PQEQEHLPCPRCDSTNTKFCYYNNYNFS
                **:  *.*  .**          **.*..   .::**:********:*************

AT3G50410.1     QPRHFCKACRRYWTHGGTLRDVPVGGGTRKSAKRSRTCSNSSSSSVSGVVSNSN--GVPL
pt036659_POPTR_ QPRHFCKSCRRYWTHGGTLRDIPVGGGTRKNAKRSRT-SATSPASFMGPMTGTNIDGLPL
                *******:*************:********.****** * :*.:*. * ::.:*  *:**

AT3G50410.1     QTTPVLFPQSSISNGVTHTVTESDGKGSALSLCGSFTSTLLNHNAAATATHGSGSVIGIG
pt036659_POPTR_ PATPVLLPLTA-NQGLSVHFGGGDGKGNGGGLGGSFTS-LLN-------TQGPAGFLALN
                 :****:* :: .:*::  .  .****.. .* ***** ***       *:*....:.:.

AT3G50410.1     GFGIGLGSGFDDVSFGLGRAMWPFSTVGTATTTNVGSNGGHHAVP-MPATWQFEGLESNA
pt036659_POPTR_ GFGLGIGPGIEDVNFALGRGLWPFPGMGDVGAS-VGGNGGAAVTAGLGNTWQFENGQEN-
                ***:*:*.*::**.*.***.:***. :* . :: **.***  ... :  *****. :.* 

AT3G50410.1     GGGFVSGEYFAWPDLSITTPGNSLK
pt036659_POPTR_ --GFVGGDCFSWPDLAISTPGNGLK
                  ***.*: *:****:*:****.**
BoxShade v3.31 C (beta, 970507) Output
AT3G50410.1     M P T - - S D S G E P R R I A M - - - - - - - K P N G V T V P I S D Q Q E Q L P C P R C D S S N T K F C Y Y N N Y N F S
pt036659_POPTR_    M P A E L S S S E A A R R A Q Q S T A A T L T K P G G A P - - - P Q E Q E H L P C P R C D S T N T K F C Y Y N N Y N F S
 
AT3G50410.1     Q P R H F C K A C R R Y W T H G G T L R D V P V G G G T R K S A K R S R T C S N S S S S S V S G V V S N S N - - G V P L
pt036659_POPTR_    Q P R H F C K S C R R Y W T H G G T L R D I P V G G G T R K N A K R S R T - S A T S P A S F M G P M T G T N I D G L P L
 
AT3G50410.1     Q T T P V L F P Q S S I S N G V T H T V T E S D G K G S A L S L C G S F T S T L L N H N A A A T A T H G S G S V I G I G
pt036659_POPTR_    P A T P V L L P L T A - N Q G L S V H F G G G D G K G N G G G L G G S F T S - L L N - - - - - - - T Q G P A G F L A L N
 
AT3G50410.1     G F G I G L G S G F D D V S F G L G R A M W P F S T V G T A T T T N V G S N G G H H A V P - M P A T W Q F E G L E S N A
pt036659_POPTR_    G F G L G I G P G I E D V N F A L G R G L W P F P G M G D V G A S - V G G N G G A A V T A G L G N T W Q F E N G Q E N -
 
AT3G50410.1     G G G F V S G E Y F A W P D L S I T T P G N S L K
pt036659_POPTR_    - - G F V G G D C F S W P D L A I S T P G N G L K
 
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