fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50410.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt036659 not found in 248aa AT3G50410.1 1st_1st 0.489311163 Ia
Pt002429 not found in 253aa AT3G50410.1 not_1st 0.453681710 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G50410.1     MPT--SDSGEPRRIAM-------KPNGVTVPISDQQEQLPCPRCDSSNTKFCYYNNYNFS
pt002429_POPTR_ MPTELSSSEKTRRPPLSTTPTSNKPGGAP---PQEQEHLPCPRCDSTNTKFCYYNNYNFS
pt036659_POPTR_ MPAELSSSEAARRAQQSTAATLTKPGGAP---PQEQEHLPCPRCDSTNTKFCYYNNYNFS
                **:  *.*  .**          **.*..   .::**:********:*************

AT3G50410.1     QPRHFCKACRRYWTHGGTLRDVPVGGGTRKSAKRSRTCSNSSSSSVSGVV-SNSNGVPLQ
pt002429_POPTR_ QPRHFCKSCRRYWTHGGTLRDIPVGGGTRKNAKRSRTSATTAASFAGPIIDNNIDNLPLP
pt036659_POPTR_ QPRHFCKSCRRYWTHGGTLRDIPVGGGTRKNAKRSRTSATSPASFMGPMTGTNIDGLPLP
                *******:*************:********.******.:.:.:*  . :  .* :.:** 

AT3G50410.1     TTPVLFPQSSISNGVTHTVTESDGKGSA----LSLCGSFTSTLLNHNAAATATHGSGSVI
pt002429_POPTR_ ATPVLVPLTASQGFSVHFGGGSDGKGNGGCGSGALGGSFTS-LLN-------TPGPAGIL
pt036659_POPTR_ ATPVLLPLTANQGLSVHFGGG-DGKGNG----GGLGGSFTS-LLN-------TQGPAGFL
                :****.* :: ..  .*     ****..     .* ***** ***       * *....:

AT3G50410.1     GIGGFGIGLGSGFDDVSFGLGRAMWPFSTVGTATTTNVGSNGGHHAVP-MPATWQFEGLE
pt002429_POPTR_ ALGRFGHGLGHGLEDVGCGLGRGLWSFPGIGD-SGAGVGGHGGVTVTAGLDNTWQFGSAG
pt036659_POPTR_ ALNGFGLGIGPGIEDVNFALGRGLWPFPGMGD-VGASVGGNGGAAVTAGLGNTWQFENGQ
                .:. ** *:* *::**. .***.:*.*. :*    :.**.:**  ... :  **** .  

AT3G50410.1     SNAGGGFVSGEYFAWPDLSITTPGNSLK
pt002429_POPTR_ QN---GFVGGDCFSWPELAISTPANGFK
pt036659_POPTR_ EN---GFVGGDCFSWPDLAISTPGNGLK
                .*   ***.*: *:**:*:*:**.*.:*
BoxShade v3.31 C (beta, 970507) Output
AT3G50410.1     M P T - - S D S G E P R R I A M - - - - - - - K P N G V T V P I S D Q Q E Q L P C P R C D S S N T K F C Y Y N N Y N F S
pt002429_POPTR_    M P T E L S S S E K T R R P P L S T T P T S N K P G G A P - - - P Q E Q E H L P C P R C D S T N T K F C Y Y N N Y N F S
pt036659_POPTR_    M P A E L S S S E A A R R A Q Q S T A A T L T K P G G A P - - - P Q E Q E H L P C P R C D S T N T K F C Y Y N N Y N F S
 
AT3G50410.1     Q P R H F C K A C R R Y W T H G G T L R D V P V G G G T R K S A K R S R T C S N S S S S S V S G V V - S N S N G V P L Q
pt002429_POPTR_    Q P R H F C K S C R R Y W T H G G T L R D I P V G G G T R K N A K R S R T S A T T A A S F A G P I I D N N I D N L P L P
pt036659_POPTR_    Q P R H F C K S C R R Y W T H G G T L R D I P V G G G T R K N A K R S R T S A T S P A S F M G P M T G T N I D G L P L P
 
AT3G50410.1     T T P V L F P Q S S I S N G V T H T V T E S D G K G S A - - - - L S L C G S F T S T L L N H N A A A T A T H G S G S V I
pt002429_POPTR_    A T P V L V P L T A S Q G F S V H F G G G S D G K G N G G C G S G A L G G S F T S - L L N - - - - - - - T P G P A G I L
pt036659_POPTR_    A T P V L L P L T A N Q G L S V H F G G G - D G K G N G - - - - G G L G G S F T S - L L N - - - - - - - T Q G P A G F L
 
AT3G50410.1     G I G G F G I G L G S G F D D V S F G L G R A M W P F S T V G T A T T T N V G S N G G H H A V P - M P A T W Q F E G L E
pt002429_POPTR_    A L G R F G H G L G H G L E D V G C G L G R G L W S F P G I G D - S G A G V G G H G G V T V T A G L D N T W Q F G S A G
pt036659_POPTR_    A L N G F G L G I G P G I E D V N F A L G R G L W P F P G M G D - V G A S V G G N G G A A V T A G L G N T W Q F E N G Q
 
AT3G50410.1     S N A G G G F V S G E Y F A W P D L S I T T P G N S L K
pt002429_POPTR_    Q N - - - G F V G G D C F S W P E L A I S T P A N G F K
pt036659_POPTR_    E N - - - G F V G G D C F S W P D L A I S T P G N G L K
 
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