fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50410.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm044750 not found in 236aa AT3G50410.1 1st_1st 0.453681710 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G50410.1     MPTSDSGEPRRIAMKPNGVTVPISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKAC
gm044750_Glyma1 MPSSNSGESRR-ASKPHRSVAAPPVEPENLPCPRCDSANTKFCYYNNYNYSQPRHFCKSC
                **:*:***.** * **:  ... . : *:********:***********:********:*

AT3G50410.1     RRYWTHGGTLRDVPVGGGTRKSAKRSRT-----CSNSSSSSVSGVVSNSNGVPLQTTPVL
gm044750_Glyma1 RRYWTHGGTLRDIPVGGGSRKNAKRSRTHHAAAATSSSSSTSSATTSAHEHHNAHTLTAL
                ************:*****:**.******     .:.****: *...*  :    :* ..*

AT3G50410.1     FPQSSISNGVTHTVTESDGKGSALSLCGSFTSTLLNHNAAATATHGSGSVIGIGGFGIGL
gm044750_Glyma1 APVTA----ATHFGHDGDVKQTNGNACGSYTSLLNN-------TQGSG-FFALGGFGLGL
                 * ::    .**   :.* * :  . ***:** * *       *:*** .:.:****:**

AT3G50410.1     GSGFDDVSFGLGRAMWPFSTVGTATTTNVGSNGGHHAVPMPATWQFEGLESNAGGGFVSG
gm044750_Glyma1 GHGFDDMGFGIGRSGWAFP--GMVDNGNI---GGAIASSGVNTWQLESGE----GGFVGG
                * ****:.**:**: *.*.  * . . *:   **  * .   ***:*. *    ****.*

AT3G50410.1     EYFAWPDLSITTPGNSLK
gm044750_Glyma1 DCFSWPGLAISTPGNGLK
                : *:**.*:*:****.**
BoxShade v3.31 C (beta, 970507) Output
AT3G50410.1     M P T S D S G E P R R I A M K P N G V T V P I S D Q Q E Q L P C P R C D S S N T K F C Y Y N N Y N F S Q P R H F C K A C
gm044750_Glyma1    M P S S N S G E S R R - A S K P H R S V A A P P V E P E N L P C P R C D S A N T K F C Y Y N N Y N Y S Q P R H F C K S C
 
AT3G50410.1     R R Y W T H G G T L R D V P V G G G T R K S A K R S R T - - - - - C S N S S S S S V S G V V S N S N G V P L Q T T P V L
gm044750_Glyma1    R R Y W T H G G T L R D I P V G G G S R K N A K R S R T H H A A A A T S S S S S T S S A T T S A H E H H N A H T L T A L
 
AT3G50410.1     F P Q S S I S N G V T H T V T E S D G K G S A L S L C G S F T S T L L N H N A A A T A T H G S G S V I G I G G F G I G L
gm044750_Glyma1    A P V T A - - - - A T H F G H D G D V K Q T N G N A C G S Y T S L L N N - - - - - - - T Q G S G - F F A L G G F G L G L
 
AT3G50410.1     G S G F D D V S F G L G R A M W P F S T V G T A T T T N V G S N G G H H A V P M P A T W Q F E G L E S N A G G G F V S G
gm044750_Glyma1    G H G F D D M G F G I G R S G W A F P - - G M V D N G N I - - - G G A I A S S G V N T W Q L E S G E - - - - G G F V G G
 
AT3G50410.1     E Y F A W P D L S I T T P G N S L K
gm044750_Glyma1    D C F S W P G L A I S T P G N G L K
 
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