fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50700.1 AIVPHGLGLGLPCGGE at 368/452 in AT3G50700.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm001789 ASVPAGLGLGLPCDSS in 395/478 AT3G50700.1 1st_1st 0.595006934 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G50700.1     MPVDLDNSSTVSGEASVSISSTGNQNPLPNSTGKKKRNLPGMPDPESEVIALSPKTLLAT
gm001789_Glyma0 MPVDLDNVSTASGEASV--SSSGNLTVPPKPTTKKKRNLPGMPDPDAEVIALSPKTLMAT
                ******* **.******  **:** .  *:.* ************::**********:**

AT3G50700.1     NRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQKSNKEVKKKVYVCPEVSCVHHDPSRAL
gm001789_Glyma0 NRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEVRKRVYVCPEPTCVHHDPSRAL
                *********************************:*.***:*:****** :**********

AT3G50700.1     GDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTKEYKCDCGTLFSRRDSF
gm001789_Glyma0 GDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSF
                *******************************************:****************

AT3G50700.1     ITHRAFCDALAEENARSHHSQSKKQNPEILTR------KNPV----PNPVPAPVDTES-A
gm001789_Glyma0 ITHRAFCDALAEESARSQPQTVAKASSESDSKAVTGDSSPPVAVEAPPPLVPPVSSQSNS
                *************.***: .   * ..*  ::      . **    * *: .**.::* :

AT3G50700.1     KIKSSSTLTIKQSESPKTPPEIVQEAPKPTSLNVVTSNGVFAGLFESSSASPSIYTTSSS
gm001789_Glyma0 VVVPSSSLQTQKPELPENSPQIIEEPKVNTAMN-------------GSCSSTSTSTTSST
                 : .**:*  ::.* *:..*:*::*.   *::*             .*.:*.*  ****:

AT3G50700.1     SKSLFASSSSI------EPISLGLSTSHGSSFLGSNRFH-------AQPAMSATALLQKA
gm001789_Glyma0 SNSNSGASSNLSRPSSSEPISLCLATNHGSSIFGTGRQERRQYAPPPQPAMSATALLQKA
                *:*  .:**.:      ***** *:*.****::*:.* .       .*************

AT3G50700.1     AQMGAASSGGSLLHGLGIVSSTSTSI-----------------DAIVPHGLGLGLPCGGE
gm001789_Glyma0 AQMGAAATNASFLRGLGIVSSSASTSSVQQDNLQWGHQPVEPESASVPAGLGLGLPC--D
                ******::..*:*:*******::::                  .* ** ********  :

AT3G50700.1     SSSGLKELMMGNSSVFGPKQTTLDFLGLGRAVGNGNGPSNGLSTLVGG-GTGIDMAT---
gm001789_Glyma0 SSSGLKELMMGTPSMFGPKQTTLDFLGLGMAA--GGTPGGGLSALITSIGGGLDVTTAAA
                ***********..*:************** *.  *. *..***:*: . * *:*::*   

AT3G50700.1     TFGSGEFSGKDISRRKS
gm001789_Glyma0 SFASGEFPGKDIGRRST
                :*.****.****.**.:
BoxShade v3.31 C (beta, 970507) Output
AT3G50700.1     M P V D L D N S S T V S G E A S V S I S S T G N Q N P L P N S T G K K K R N L P G M P D P E S E V I A L S P K T L L A T
gm001789_Glyma0    M P V D L D N V S T A S G E A S V - - S S S G N L T V P P K P T T K K K R N L P G M P D P D A E V I A L S P K T L M A T
 
AT3G50700.1     N R F V C E I C N K G F Q R D Q N L Q L H R R G H N L P W K L R Q K S N K E V K K K V Y V C P E V S C V H H D P S R A L
gm001789_Glyma0    N R F V C E I C N K G F Q R D Q N L Q L H R R G H N L P W K L R Q R S S K E V R K R V Y V C P E P T C V H H D P S R A L
 
AT3G50700.1     G D L T G I K K H F C R K H G E K K W K C D K C S K K Y A V Q S D W K A H S K I C G T K E Y K C D C G T L F S R R D S F
gm001789_Glyma0    G D L T G I K K H F C R K H G E K K W K C D K C S K K Y A V Q S D W K A H S K I C G T R E Y K C D C G T L F S R R D S F
 
AT3G50700.1     I T H R A F C D A L A E E N A R S H H S Q S K K Q N P E I L T R - - - - - - K N P V - - - - P N P V P A P V D T E S - A
gm001789_Glyma0    I T H R A F C D A L A E E S A R S Q P Q T V A K A S S E S D S K A V T G D S S P P V A V E A P P P L V P P V S S Q S N S
 
AT3G50700.1     K I K S S S T L T I K Q S E S P K T P P E I V Q E A P K P T S L N V V T S N G V F A G L F E S S S A S P S I Y T T S S S
gm001789_Glyma0    V V V P S S S L Q T Q K P E L P E N S P Q I I E E P K V N T A M N - - - - - - - - - - - - - G S C S S T S T S T T S S T
 
AT3G50700.1     S K S L F A S S S S I - - - - - - E P I S L G L S T S H G S S F L G S N R F H - - - - - - - A Q P A M S A T A L L Q K A
gm001789_Glyma0    S N S N S G A S S N L S R P S S S E P I S L C L A T N H G S S I F G T G R Q E R R Q Y A P P P Q P A M S A T A L L Q K A
 
AT3G50700.1     A Q M G A A S S G G S L L H G L G I V S S T S T S I - - - - - - - - - - - - - - - - - D A I V P H G L G L G L P C G G E
gm001789_Glyma0    A Q M G A A A T N A S F L R G L G I V S S S A S T S S V Q Q D N L Q W G H Q P V E P E S A S V P A G L G L G L P C - - D
 
AT3G50700.1     S S S G L K E L M M G N S S V F G P K Q T T L D F L G L G R A V G N G N G P S N G L S T L V G G - G T G I D M A T - - -
gm001789_Glyma0    S S S G L K E L M M G T P S M F G P K Q T T L D F L G L G M A A - - G G T P G G G L S A L I T S I G G G L D V T T A A A
 
AT3G50700.1     T F G S G E F S G K D I S R R K S
gm001789_Glyma0    S F A S G E F P G K D I G R R S T
 
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