fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50700.1 AIVPHGLGLGLPCGGE at 368/452 in AT3G50700.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os011706 not found in 432aa AT5G66730.1 1st_not 0.420249653 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G50700.1     MPVDLDNSSTVSGEASVSISSTGNQ----NPLPNSTGKKKRNLPGMPDPESEVIALSPKT
Os011706_Os03t0 MEVE-----TSSGTAERGAGAGAQQQPPPQPQPQPPAKKKRALPGMPDPDAEVIALSPKT
                * *:     * ** *. . .: .:*    :* *:...**** *******::*********

AT3G50700.1     LLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQKSNKEVKKKVYVCPEVSCVHHDP
Os011706_Os03t0 LLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSGKEVRKRVYVCPEPTCVHHDP
                *************************************:*.***:*:****** :******

AT3G50700.1     SRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTKEYKCDCGTLFSR
Os011706_Os03t0 SRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHTKTCGSREYRCDCGTLFSR
                *****************************************:* **::**:*********

AT3G50700.1     RDSFITHRAFCDALAEENARSHH-----------SQSKKQNPEILTRKNPVPNPVPAPVD
Os011706_Os03t0 RDSFITHRAFCDALAEESAKARAAPPPPADEDGTSASAGAPPPQAPLPPPAPVPAPAPPP
                *****************.*:::            * *    *   .   *.* *.***  

AT3G50700.1     TESA--------------------KIKSSSTLTIKQSESP-----KTPPEIVQEAPKPTS
Os011706_Os03t0 PPAAAPAPAAQPEQRAAAVAAWRRRRKASLAACLHRRRWPRRRSTRTPSELERVA-----
                . :*                    : *:* :  ::: . *     :**.*: : *     

AT3G50700.1     LNVVTSNGVFAGLFESSSASPSIYTTSSSS-------KSLFASSSSIEPISLGLSTSHGS
Os011706_Os03t0 -------------IRSARCLPSLRRCASRPTRRRRCLRRLYQLT--------------GS
                             :.*: . **:   :* .       : *:  :              **

AT3G50700.1     SFLGSNRFHAQP----------------------------AMSATALLQKAAQMGAASSG
Os011706_Os03t0 SSL---RRHRRPRRRTCPPRRCFRRPRRWAPPRLARPFSAAWASTCHRHRRRRLRRQGS-
                * *   * * :*                            * ::*.  ::  ::   .* 

AT3G50700.1     GSLLHGLGIVSSTSTSIDAIVP---HGLGLGLPCGGESSSGLKELMMGNSSVFGPKQTTL
Os011706_Os03t0 ----------SNSTTTITTKKPCKCHSRRVRCPNGRR-----------------------
                          *.::*:* :  *   *.  :  * * .                       

AT3G50700.1     DFLGLGRAVGNGNGPSNGLSTLVGGGTGIDMATTFGSGEFSGKDISRRKS-
Os011706_Os03t0 ---GYSRSHPQCCPP----------------------GSASGYHTTRQAVR
                   * .*:  :   *                      *. ** . :*:
BoxShade v3.31 C (beta, 970507) Output
AT3G50700.1     M P V D L D N S S T V S G E A S V S I S S T G N Q - - - - N P L P N S T G K K K R N L P G M P D P E S E V I A L S P K T
Os011706_Os03t0    M E V E - - - - - T S S G T A E R G A G A G A Q Q Q P P P Q P Q P Q P P A K K K R A L P G M P D P D A E V I A L S P K T
 
AT3G50700.1     L L A T N R F V C E I C N K G F Q R D Q N L Q L H R R G H N L P W K L R Q K S N K E V K K K V Y V C P E V S C V H H D P
Os011706_Os03t0    L L A T N R F V C E I C N K G F Q R D Q N L Q L H R R G H N L P W K L R Q R S G K E V R K R V Y V C P E P T C V H H D P
 
AT3G50700.1     S R A L G D L T G I K K H F C R K H G E K K W K C D K C S K K Y A V Q S D W K A H S K I C G T K E Y K C D C G T L F S R
Os011706_Os03t0    S R A L G D L T G I K K H F C R K H G E K K W K C D K C S K K Y A V Q S D W K A H T K T C G S R E Y R C D C G T L F S R
 
AT3G50700.1     R D S F I T H R A F C D A L A E E N A R S H H - - - - - - - - - - - S Q S K K Q N P E I L T R K N P V P N P V P A P V D
Os011706_Os03t0    R D S F I T H R A F C D A L A E E S A K A R A A P P P P A D E D G T S A S A G A P P P Q A P L P P P A P V P A P A P P P
 
AT3G50700.1     T E S A - - - - - - - - - - - - - - - - - - - - K I K S S S T L T I K Q S E S P - - - - - K T P P E I V Q E A P K P T S
Os011706_Os03t0    P P A A A P A P A A Q P E Q R A A A V A A W R R R R K A S L A A C L H R R R W P R R R S T R T P S E L E R V A - - - - -
 
AT3G50700.1     L N V V T S N G V F A G L F E S S S A S P S I Y T T S S S S - - - - - - - K S L F A S S S S I E P I S L G L S T S H G S
Os011706_Os03t0    - - - - - - - - - - - - - I R S A R C L P S L R R C A S R P T R R R R C L R R L Y Q L T - - - - - - - - - - - - - - G S
 
AT3G50700.1     S F L G S N R F H A Q P - - - - - - - - - - - - - - - - - - - - - - - - - - - - A M S A T A L L Q K A A Q M G A A S S G
Os011706_Os03t0    S S L - - - R R H R R P R R R T C P P R R C F R R P R R W A P P R L A R P F S A A W A S T C H R H R R R R L R R Q G S -
 
AT3G50700.1     G S L L H G L G I V S S T S T S I D A I V P - - - H G L G L G L P C G G E S S S G L K E L M M G N S S V F G P K Q T T L
Os011706_Os03t0    - - - - - - - - - - S N S T T T I T T K K P C K C H S R R V R C P N G R R - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G50700.1     D F L G L G R A V G N G N G P S N G L S T L V G G G T G I D M A T T F G S G E F S G K D I S R R K S -
Os011706_Os03t0    - - - G Y S R S H P Q C C P P - - - - - - - - - - - - - - - - - - - - - - G S A S G Y H T T R Q A V R
 
0