fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50750.1 DVGIDDLELTLGHNTK at 262/276 in AT3G50750.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt001732 EIGVDDLELTLGSGKV in 293/319 AT1G75080.2 1st_not 0.59 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G50750.1     MTASGGGSTAATGRMPTWKERENNKKRERRRRAIAAKIFTGLRSQGNYKLPKHCDNNEVL
pt001732_POPTR_ MTA--GGSSA---RLPTWKERENNMRRERRRRAIAAKIYTGLRTQGNYKLPKHCDNNEVL
                ***  ***:*   *:********* :************:****:****************

AT3G50750.1     KALCLEAGWIVHEDGTTYRKGSRPTETTV--------PCSSIQLSPQSSAFQSPIPSYQA
pt001732_POPTR_ KALCAEAGWIVEEDGTTYRKGCKPPPSEIAGMPANISACSSIQPSPQSSNFASPVPSYHA
                **** ******.*********.:*. : :        .***** ***** * **:***:*

AT3G50750.1     SPSSSSYPSPTRFDPNQSSTYLIPYLQNLAS-SGNLAPLRISNSAPVTPPISSPR-RSNP
pt001732_POPTR_ SPSSSSFPSPTCFDGN-SSTYLLPFLRNIASIPTNLPPLRISNSAPVTPPRSSPTCRSSK
                ******:**** ** * *****:*:*:*:** . **.************* ***  **. 

AT3G50750.1     RLPRWQS-SN----------FPVSAPSSPTRRLHHY-TSIPECDESDVSTVDSCRWGNFQ
pt001732_POPTR_ RKVDWESLSNGSLNSFRHPLFAASAPSSPTRRPHLTPATIPECDESDASTVDSGRWLSFQ
                *   *:* **          *..********* *   ::********.***** ** .**

AT3G50750.1     SVNVSQTCPPSPTFNLVGKSVS-----SVGVD-----------VSVKPWEGEKIHDVGID
pt001732_POPTR_ AV-APQVAPPSPTFNLV-KPVDQQCAFQIGVDRHEGAEFEFENCRVKPWEGERIHEIGVD
                :* ..*..********* *.*.     .:***             *******:**::*:*

AT3G50750.1     DLELTLGH-NTKGRG------------
pt001732_POPTR_ DLELTLGSGKVHGQASIDDLAWERSNK
                *******  :.:*:.
BoxShade v3.31 C (beta, 970507) Output
AT3G50750.1     M T A S G G G S T A A T G R M P T W K E R E N N K K R E R R R R A I A A K I F T G L R S Q G N Y K L P K H C D N N E V L
pt001732_POPTR_    M T A - - G G S S A - - - R L P T W K E R E N N M R R E R R R R A I A A K I Y T G L R T Q G N Y K L P K H C D N N E V L
 
AT3G50750.1     K A L C L E A G W I V H E D G T T Y R K G S R P T E T T V - - - - - - - - P C S S I Q L S P Q S S A F Q S P I P S Y Q A
pt001732_POPTR_    K A L C A E A G W I V E E D G T T Y R K G C K P P P S E I A G M P A N I S A C S S I Q P S P Q S S N F A S P V P S Y H A
 
AT3G50750.1     S P S S S S Y P S P T R F D P N Q S S T Y L I P Y L Q N L A S - S G N L A P L R I S N S A P V T P P I S S P R - R S N P
pt001732_POPTR_    S P S S S S F P S P T C F D G N - S S T Y L L P F L R N I A S I P T N L P P L R I S N S A P V T P P R S S P T C R S S K
 
AT3G50750.1     R L P R W Q S - S N - - - - - - - - - - F P V S A P S S P T R R L H H Y - T S I P E C D E S D V S T V D S C R W G N F Q
pt001732_POPTR_    R K V D W E S L S N G S L N S F R H P L F A A S A P S S P T R R P H L T P A T I P E C D E S D A S T V D S G R W L S F Q
 
AT3G50750.1     S V N V S Q T C P P S P T F N L V G K S V S - - - - - S V G V D - - - - - - - - - - - V S V K P W E G E K I H D V G I D
pt001732_POPTR_    A V - A P Q V A P P S P T F N L V - K P V D Q Q C A F Q I G V D R H E G A E F E F E N C R V K P W E G E R I H E I G V D
 
AT3G50750.1     D L E L T L G H - N T K G R G - - - - - - - - - - - -
pt001732_POPTR_    D L E L T L G S G K V H G Q A S I D D L A W E R S N K
 
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