fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50750.1 DVGIDDLELTLGHNTK at 262/276 in AT3G50750.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os028778 EVAAEELELTLGVGAK in 288/298 AT1G19350.6 1st_not 0.5025 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G50750.1     MTASGGGSTAATGRMPTWKERENNKKRERRRRAIAAKIFTGLRSQGNYKLPKHCDNNEVL
Os028778_Os07t0 MTSGA----AAAGRTPTWKERENNKRRERRRRAIAAKIFTGLRALGNYNLPKHCDNNEVL
                **:..    **:** **********:*****************: ***:***********

AT3G50750.1     KALCLEAGWIVHEDGTTYRKGSRPTETTV--------PCSSIQ-LSPQSSAFQSPIPSYQ
Os028778_Os07t0 KALCREAGWVVEDDGTTYRKGCKPPPSSAGGASVGMSPCSSTQLLSAPSSSFPSPVPSYH
                **** ****:*.:********.:*. ::.        **** * **. **:* **:***:

AT3G50750.1     ASPSSSSYPSPTRFDPNQSSTYLIPYLQNLASSGNLAPLRISNSAPVTPPISSPRRSNP-
Os028778_Os07t0 ASPASSSFPSPSRID-NPSASCLLPFLRGLP---NLPPLRVSSSAPVTPPLSSPTASRPP
                ***:***:***:*:* * *:: *:*:*:.*.   **.***:*.*******:***  *.* 

AT3G50750.1     --RLPRW-----QSSNFPVSAPSSPT--RRLHHYTSIPECDESDVSTVDSCRWGNFQSVN
Os028778_Os07t0 KIRKPDWDVDPFRHPFFAVSAPASPTRGRRLEHPDTIPECDESDVSTVDSGRWISFQ---
                  * * *     : . *.****:***  ***.*  :************** ** .**   

AT3G50750.1     VSQTCPPSPTFNLV--GKSVSSV----------GVDVS-----VKPWEGEKIHDVGIDDL
Os028778_Os07t0 MATTAPTSPTYNLVNPGASTSNSMEIEGTAGRGGAEFEFDKGRVTPWEGERIHEVAAEEL
                :: *.*.***:***  * *.*.           *.:..     *.*****:**:*. ::*

AT3G50750.1     ELTLGHNTKGRG
Os028778_Os07t0 ELTLGVGAK---
                ***** .:*
BoxShade v3.31 C (beta, 970507) Output
AT3G50750.1     M T A S G G G S T A A T G R M P T W K E R E N N K K R E R R R R A I A A K I F T G L R S Q G N Y K L P K H C D N N E V L
Os028778_Os07t0    M T S G A - - - - A A A G R T P T W K E R E N N K R R E R R R R A I A A K I F T G L R A L G N Y N L P K H C D N N E V L
 
AT3G50750.1     K A L C L E A G W I V H E D G T T Y R K G S R P T E T T V - - - - - - - - P C S S I Q - L S P Q S S A F Q S P I P S Y Q
Os028778_Os07t0    K A L C R E A G W V V E D D G T T Y R K G C K P P P S S A G G A S V G M S P C S S T Q L L S A P S S S F P S P V P S Y H
 
AT3G50750.1     A S P S S S S Y P S P T R F D P N Q S S T Y L I P Y L Q N L A S S G N L A P L R I S N S A P V T P P I S S P R R S N P -
Os028778_Os07t0    A S P A S S S F P S P S R I D - N P S A S C L L P F L R G L P - - - N L P P L R V S S S A P V T P P L S S P T A S R P P
 
AT3G50750.1     - - R L P R W - - - - - Q S S N F P V S A P S S P T - - R R L H H Y T S I P E C D E S D V S T V D S C R W G N F Q S V N
Os028778_Os07t0    K I R K P D W D V D P F R H P F F A V S A P A S P T R G R R L E H P D T I P E C D E S D V S T V D S G R W I S F Q - - -
 
AT3G50750.1     V S Q T C P P S P T F N L V - - G K S V S S V - - - - - - - - - - G V D V S - - - - - V K P W E G E K I H D V G I D D L
Os028778_Os07t0    M A T T A P T S P T Y N L V N P G A S T S N S M E I E G T A G R G G A E F E F D K G R V T P W E G E R I H E V A A E E L
 
AT3G50750.1     E L T L G H N T K G R G
Os028778_Os07t0    E L T L G V G A K - - -
 
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