fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50870.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt036671 not found in 254aa AT3G50870.1 1st_1st 0.414587332 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G50870.1     MMQTPYTTSTQGQYCH-----SCGMFHHHSQSCCYNNNNNSNAGSYSMVFSMQNGGVFEQ
pt036671_POPTR_ MMH-----RCSSSHCNMVGPCSCSMYHTQSN-------------SFSMLFSMPN------
                **:       ...:*:     **.*:* :*:             *:**:*** *      

AT3G50870.1     NGEDYHHS-------------SSLVDCTLSLGTPSTRLCEEDEKRRRSTSSGASSCISNF
pt036671_POPTR_ -----HHKSFDETDMYPVTSPSSSVDCTLSLGTPSTRLSEDDEKRMRHDQRRSGSCMSNF
                     **.             ** **************.*:**** *  .  :.**:***

AT3G50870.1     -WDLIHTKNNNSKTAPYNNVPSFSANKPSRGCSGGGGGGGGG-GGGDSLLARRCANCDTT
pt036671_POPTR_ CWDILQTKNNSTPYPP-------QAHKTSRGSSNSSHNSNNNLANNDPLLARRCANCDTT
                 **:::****.:  .*       .*:*.***.*... ..... ...*.************

AT3G50870.1     STPLWRNGPRGPKSLCNACGIRFKKEERRTTAATGNTVVGAAPVQTDQYGHHNSGYNNYH
pt036671_POPTR_ STPLWRNGPRGPKSLCNACGIRFKKEERRATAASANNASASGAME-QHYGYH--------
                *****************************:***:.*.. .:..:: ::**:*        

AT3G50870.1     AATNNNNNNGTPWAHHHSTQRVPCNYPANEIRFMDDYGSGVANNVESDGAHGGVPFLSWR
pt036671_POPTR_ -----QNNS---WVQ---TQKMPCFSPANEFRFIED------NDRDSDTGN-NIPFLSWR
                     :**.   *.:   **::**  ****:**::*      *: :** .: .:******

AT3G50870.1     LNVADRAS-LVHDFTR-
pt036671_POPTR_ LNVTDRPSQLVHDFTRY
                ***:**.* *******
BoxShade v3.31 C (beta, 970507) Output
AT3G50870.1     M M Q T P Y T T S T Q G Q Y C H - - - - - S C G M F H H H S Q S C C Y N N N N N S N A G S Y S M V F S M Q N G G V F E Q
pt036671_POPTR_    M M H - - - - - R C S S S H C N M V G P C S C S M Y H T Q S N - - - - - - - - - - - - - S F S M L F S M P N - - - - - -
 
AT3G50870.1     N G E D Y H H S - - - - - - - - - - - - - S S L V D C T L S L G T P S T R L C E E D E K R R R S T S S G A S S C I S N F
pt036671_POPTR_    - - - - - H H K S F D E T D M Y P V T S P S S S V D C T L S L G T P S T R L S E D D E K R M R H D Q R R S G S C M S N F
 
AT3G50870.1     - W D L I H T K N N N S K T A P Y N N V P S F S A N K P S R G C S G G G G G G G G G - G G G D S L L A R R C A N C D T T
pt036671_POPTR_    C W D I L Q T K N N S T P Y P P - - - - - - - Q A H K T S R G S S N S S H N S N N N L A N N D P L L A R R C A N C D T T
 
AT3G50870.1     S T P L W R N G P R G P K S L C N A C G I R F K K E E R R T T A A T G N T V V G A A P V Q T D Q Y G H H N S G Y N N Y H
pt036671_POPTR_    S T P L W R N G P R G P K S L C N A C G I R F K K E E R R A T A A S A N N A S A S G A M E - Q H Y G Y H - - - - - - - -
 
AT3G50870.1     A A T N N N N N N G T P W A H H H S T Q R V P C N Y P A N E I R F M D D Y G S G V A N N V E S D G A H G G V P F L S W R
pt036671_POPTR_    - - - - - Q N N S - - - W V Q - - - T Q K M P C F S P A N E F R F I E D - - - - - - N D R D S D T G N - N I P F L S W R
 
AT3G50870.1     L N V A D R A S - L V H D F T R -
pt036671_POPTR_    L N V T D R P S Q L V H D F T R Y
 
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