Input
| Putative repression domain
|
|
AT3G50870.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt036671 |
not found in 254aa |
AT3G50870.1 |
1st_1st |
0.414587332 |
Ia |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT3G50870.1 MMQTPYTTSTQGQYCH-----SCGMFHHHSQSCCYNNNNNSNAGSYSMVFSMQNGGVFEQ
pt036671_POPTR_ MMH-----RCSSSHCNMVGPCSCSMYHTQSN-------------SFSMLFSMPN------
**: ...:*: **.*:* :*: *:**:*** *
AT3G50870.1 NGEDYHHS-------------SSLVDCTLSLGTPSTRLCEEDEKRRRSTSSGASSCISNF
pt036671_POPTR_ -----HHKSFDETDMYPVTSPSSSVDCTLSLGTPSTRLSEDDEKRMRHDQRRSGSCMSNF
**. ** **************.*:**** * . :.**:***
AT3G50870.1 -WDLIHTKNNNSKTAPYNNVPSFSANKPSRGCSGGGGGGGGG-GGGDSLLARRCANCDTT
pt036671_POPTR_ CWDILQTKNNSTPYPP-------QAHKTSRGSSNSSHNSNNNLANNDPLLARRCANCDTT
**:::****.: .* .*:*.***.*... ..... ...*.************
AT3G50870.1 STPLWRNGPRGPKSLCNACGIRFKKEERRTTAATGNTVVGAAPVQTDQYGHHNSGYNNYH
pt036671_POPTR_ STPLWRNGPRGPKSLCNACGIRFKKEERRATAASANNASASGAME-QHYGYH--------
*****************************:***:.*.. .:..:: ::**:*
AT3G50870.1 AATNNNNNNGTPWAHHHSTQRVPCNYPANEIRFMDDYGSGVANNVESDGAHGGVPFLSWR
pt036671_POPTR_ -----QNNS---WVQ---TQKMPCFSPANEFRFIED------NDRDSDTGN-NIPFLSWR
:**. *.: **::** ****:**::* *: :** .: .:******
AT3G50870.1 LNVADRAS-LVHDFTR-
pt036671_POPTR_ LNVTDRPSQLVHDFTRY
***:**.* *******
BoxShade v3.31 C (beta, 970507) Output
AT3G50870.1 |
M |
M |
Q |
T |
P |
Y |
T |
T |
S |
T |
Q |
G |
Q |
Y |
C |
H |
- |
- |
- |
- |
- |
S |
C |
G |
M |
F |
H |
H |
H |
S |
Q |
S |
C |
C |
Y |
N |
N |
N |
N |
N |
S |
N |
A |
G |
S |
Y |
S |
M |
V |
F |
S |
M |
Q |
N |
G |
G |
V |
F |
E |
Q |
pt036671_POPTR_ |
M |
M |
H |
- |
- |
- |
- |
- |
R |
C |
S |
S |
S |
H |
C |
N |
M |
V |
G |
P |
C |
S |
C |
S |
M |
Y |
H |
T |
Q |
S |
N |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
S |
F |
S |
M |
L |
F |
S |
M |
P |
N |
- |
- |
- |
- |
- |
- |
|
AT3G50870.1 |
N |
G |
E |
D |
Y |
H |
H |
S |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
S |
S |
L |
V |
D |
C |
T |
L |
S |
L |
G |
T |
P |
S |
T |
R |
L |
C |
E |
E |
D |
E |
K |
R |
R |
R |
S |
T |
S |
S |
G |
A |
S |
S |
C |
I |
S |
N |
F |
pt036671_POPTR_ |
- |
- |
- |
- |
- |
H |
H |
K |
S |
F |
D |
E |
T |
D |
M |
Y |
P |
V |
T |
S |
P |
S |
S |
S |
V |
D |
C |
T |
L |
S |
L |
G |
T |
P |
S |
T |
R |
L |
S |
E |
D |
D |
E |
K |
R |
M |
R |
H |
D |
Q |
R |
R |
S |
G |
S |
C |
M |
S |
N |
F |
|
AT3G50870.1 |
- |
W |
D |
L |
I |
H |
T |
K |
N |
N |
N |
S |
K |
T |
A |
P |
Y |
N |
N |
V |
P |
S |
F |
S |
A |
N |
K |
P |
S |
R |
G |
C |
S |
G |
G |
G |
G |
G |
G |
G |
G |
G |
- |
G |
G |
G |
D |
S |
L |
L |
A |
R |
R |
C |
A |
N |
C |
D |
T |
T |
pt036671_POPTR_ |
C |
W |
D |
I |
L |
Q |
T |
K |
N |
N |
S |
T |
P |
Y |
P |
P |
- |
- |
- |
- |
- |
- |
- |
Q |
A |
H |
K |
T |
S |
R |
G |
S |
S |
N |
S |
S |
H |
N |
S |
N |
N |
N |
L |
A |
N |
N |
D |
P |
L |
L |
A |
R |
R |
C |
A |
N |
C |
D |
T |
T |
|
AT3G50870.1 |
S |
T |
P |
L |
W |
R |
N |
G |
P |
R |
G |
P |
K |
S |
L |
C |
N |
A |
C |
G |
I |
R |
F |
K |
K |
E |
E |
R |
R |
T |
T |
A |
A |
T |
G |
N |
T |
V |
V |
G |
A |
A |
P |
V |
Q |
T |
D |
Q |
Y |
G |
H |
H |
N |
S |
G |
Y |
N |
N |
Y |
H |
pt036671_POPTR_ |
S |
T |
P |
L |
W |
R |
N |
G |
P |
R |
G |
P |
K |
S |
L |
C |
N |
A |
C |
G |
I |
R |
F |
K |
K |
E |
E |
R |
R |
A |
T |
A |
A |
S |
A |
N |
N |
A |
S |
A |
S |
G |
A |
M |
E |
- |
Q |
H |
Y |
G |
Y |
H |
- |
- |
- |
- |
- |
- |
- |
- |
|
AT3G50870.1 |
A |
A |
T |
N |
N |
N |
N |
N |
N |
G |
T |
P |
W |
A |
H |
H |
H |
S |
T |
Q |
R |
V |
P |
C |
N |
Y |
P |
A |
N |
E |
I |
R |
F |
M |
D |
D |
Y |
G |
S |
G |
V |
A |
N |
N |
V |
E |
S |
D |
G |
A |
H |
G |
G |
V |
P |
F |
L |
S |
W |
R |
pt036671_POPTR_ |
- |
- |
- |
- |
- |
Q |
N |
N |
S |
- |
- |
- |
W |
V |
Q |
- |
- |
- |
T |
Q |
K |
M |
P |
C |
F |
S |
P |
A |
N |
E |
F |
R |
F |
I |
E |
D |
- |
- |
- |
- |
- |
- |
N |
D |
R |
D |
S |
D |
T |
G |
N |
- |
N |
I |
P |
F |
L |
S |
W |
R |
|
AT3G50870.1 |
L |
N |
V |
A |
D |
R |
A |
S |
- |
L |
V |
H |
D |
F |
T |
R |
- |
pt036671_POPTR_ |
L |
N |
V |
T |
D |
R |
P |
S |
Q |
L |
V |
H |
D |
F |
T |
R |
Y |
|
|