fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50870.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt036671 not found in 254aa AT3G50870.1 1st_1st 0.414587332 Ia
Pt002821 not found in 254aa AT3G50870.1 not_1st 0.404990403 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G50870.1     MMQTPYTTSTQGQYCH-----SCGMFHHHSQSCCYNNNNNSNAGSYSMVFSMQNGGVFEQ
pt002821_POPTR_ MMHR--CSSSQ---CNMVGSCSCGMYH-------------SQSNSFSMLFSMPD------
pt036671_POPTR_ MMHR--CSSSH---CNMVGPCSCSMYH-------------TQSNSFSMLFSMPN------
                **:    :*::   *:     **.*:*             :::.*:**:*** :      

AT3G50870.1     NGEDYHHS-------------SSLVDCTLSLGTPSTRLCEEDEKRRRSTSSGASSCISNF
pt002821_POPTR_ -----HHKSFDETDMYPFTPPSSSVDCTLSLGTPSTRLSEDDEKRTRHDQRRSGSCMSNY
pt036671_POPTR_ -----HHKSFDETDMYPVTSPSSSVDCTLSLGTPSTRLSEDDEKRMRHDQRRSGSCMSNF
                     **.             ** **************.*:**** *  .  :.**:**:

AT3G50870.1     -WDLIHTKNNNSKTAPYNNVPSFSANKPSRG-CSGGGGGGGGGGGGDSLLARRCANCDTT
pt002821_POPTR_ CWDILQTKNDSTPYPP-------QAHKTSRG-NNTCHGSNSNFANNDPLLARRCANCDTT
pt036671_POPTR_ CWDILQTKNNSTPYPP-------QAHKTSRGSSNSSHNSNNNLANNDPLLARRCANCDTT
                 **:::***:.:  .*       .*:*.***  .   ..... ...*.************

AT3G50870.1     STPLWRNGPRGPKSLCNACGIRFKKEERRTTAATGN-TVVGAAPVQTDQYGHHNSGYNNY
pt002821_POPTR_ STPLWRNGPRGPKSLCNACGIRFKKEERRATAANASNANANASGGMEQHYGYH-------
pt036671_POPTR_ STPLWRNGPRGPKSLCNACGIRFKKEERRATAASAN--NASASGAMEQHYGYH-------
                *****************************:***...   ..*:    ::**:*       

AT3G50870.1     HAATNNNNNNGTPWAHHHSTQRVPCNYPANEIRFMDDYGSGVANNVESDGAHGGVPFLSW
pt002821_POPTR_ ------QNNS---WVQ---NQKMPCFSPANEFSFIED------NDRDSDTG--NIPFLSW
pt036671_POPTR_ ------QNNS---WVQ---TQKMPCFSPANEFRFIED------NDRDSDTGN-NIPFLSW
                      :**.   *.:   .*::**  ****: *::*      *: :** .  .:*****

AT3G50870.1     RLNVADRAS-LVHDFTR-
pt002821_POPTR_ RLNVTDRPSQLVHDFTRY
pt036671_POPTR_ RLNVTDRPSQLVHDFTRY
                ****:**.* *******
BoxShade v3.31 C (beta, 970507) Output
AT3G50870.1     M M Q T P Y T T S T Q G Q Y C H - - - - - S C G M F H H H S Q S C C Y N N N N N S N A G S Y S M V F S M Q N G G V F E Q
pt002821_POPTR_    M M H R - - C S S S Q - - - C N M V G S C S C G M Y H - - - - - - - - - - - - - S Q S N S F S M L F S M P D - - - - - -
pt036671_POPTR_    M M H R - - C S S S H - - - C N M V G P C S C S M Y H - - - - - - - - - - - - - T Q S N S F S M L F S M P N - - - - - -
 
AT3G50870.1     N G E D Y H H S - - - - - - - - - - - - - S S L V D C T L S L G T P S T R L C E E D E K R R R S T S S G A S S C I S N F
pt002821_POPTR_    - - - - - H H K S F D E T D M Y P F T P P S S S V D C T L S L G T P S T R L S E D D E K R T R H D Q R R S G S C M S N Y
pt036671_POPTR_    - - - - - H H K S F D E T D M Y P V T S P S S S V D C T L S L G T P S T R L S E D D E K R M R H D Q R R S G S C M S N F
 
AT3G50870.1     - W D L I H T K N N N S K T A P Y N N V P S F S A N K P S R G - C S G G G G G G G G G G G G D S L L A R R C A N C D T T
pt002821_POPTR_    C W D I L Q T K N D S T P Y P P - - - - - - - Q A H K T S R G - N N T C H G S N S N F A N N D P L L A R R C A N C D T T
pt036671_POPTR_    C W D I L Q T K N N S T P Y P P - - - - - - - Q A H K T S R G S S N S S H N S N N N L A N N D P L L A R R C A N C D T T
 
AT3G50870.1     S T P L W R N G P R G P K S L C N A C G I R F K K E E R R T T A A T G N - T V V G A A P V Q T D Q Y G H H N S G Y N N Y
pt002821_POPTR_    S T P L W R N G P R G P K S L C N A C G I R F K K E E R R A T A A N A S N A N A N A S G G M E Q H Y G Y H - - - - - - -
pt036671_POPTR_    S T P L W R N G P R G P K S L C N A C G I R F K K E E R R A T A A S A N - - N A S A S G A M E Q H Y G Y H - - - - - - -
 
AT3G50870.1     H A A T N N N N N N G T P W A H H H S T Q R V P C N Y P A N E I R F M D D Y G S G V A N N V E S D G A H G G V P F L S W
pt002821_POPTR_    - - - - - - Q N N S - - - W V Q - - - N Q K M P C F S P A N E F S F I E D - - - - - - N D R D S D T G - - N I P F L S W
pt036671_POPTR_    - - - - - - Q N N S - - - W V Q - - - T Q K M P C F S P A N E F R F I E D - - - - - - N D R D S D T G N - N I P F L S W
 
AT3G50870.1     R L N V A D R A S - L V H D F T R -
pt002821_POPTR_    R L N V T D R P S Q L V H D F T R Y
pt036671_POPTR_    R L N V T D R P S Q L V H D F T R Y
 
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