fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50870.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm003143 not found in 234aa AT3G50870.1 1st_1st 0.376199616 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G50870.1     MMQTPYTTSTQGQYCHSCGMFHHHSQSCCYNNNNNSNAGSY-SMVFSMQNGGVFEQNGED
gm003143_Glyma0 -MGT----------C-TCGMYHNH---------NSSEASSYGSMLFSMPNNNEYYQEHDI
                 * *          * :***:*:*         *.*:*.** **:*** *.. : *: : 

AT3G50870.1     Y-----HHSSSLVDCTLSLGTPSTRLC--EEDEKR-RRSTSSGASS-CISNFWDLIHTKN
gm003143_Glyma0 YSSFTPSHSS--VDCTLSLGTPSTRLTQDEDDNKRHRHQRRSGVTSFC----WDLLHSNH
                *      ***  **************   *:*:** *:.  **.:* *    ***:*:::

AT3G50870.1     NNSKTAPYNNVPSFSANKPSRGCSGGGGGGGGGGGGDSLLARRCANCDTTSTPLWRNGPR
gm003143_Glyma0 NN------NNITQSQSKSSSRGSN---------NNNDSLLARRCANCDTTSTPLWRNGPR
                **      **:.. .::..***..         ...************************

AT3G50870.1     GPKSLCNACGIRFKKEERRTTAATGNTVVGAAPVQTDQ----YGHHNSGYNNYHAATNNN
gm003143_Glyma0 GPKSLCNACGIRFKKEQRRASAAGATSASAAVPGGAMESARVYGHH-------------H
                ****************:**::** ..:. .*.*  : :    ****             :

AT3G50870.1     NNNGTPWAHHHSTQRVPCNYPANEIRFMDDYGSGVANNVESDGAHGGVPFLSWRLNVADR
gm003143_Glyma0 NNS---WYAHSQSQKM----MGNELRFMDD-----SDDRDSD--NNGIPFLSWKLNIPDR
                **.   *  * .:*::     .**:*****     ::: :**  :.*:*****:**:.**

AT3G50870.1     ASLVHDFTR
gm003143_Glyma0 TSL------
                :**
BoxShade v3.31 C (beta, 970507) Output
AT3G50870.1     M M Q T P Y T T S T Q G Q Y C H S C G M F H H H S Q S C C Y N N N N N S N A G S Y - S M V F S M Q N G G V F E Q N G E D
gm003143_Glyma0    - M G T - - - - - - - - - - C - T C G M Y H N H - - - - - - - - - N S S E A S S Y G S M L F S M P N N N E Y Y Q E H D I
 
AT3G50870.1     Y - - - - - H H S S S L V D C T L S L G T P S T R L C - - E E D E K R - R R S T S S G A S S - C I S N F W D L I H T K N
gm003143_Glyma0    Y S S F T P S H S S - - V D C T L S L G T P S T R L T Q D E D D N K R H R H Q R R S G V T S F C - - - - W D L L H S N H
 
AT3G50870.1     N N S K T A P Y N N V P S F S A N K P S R G C S G G G G G G G G G G G G D S L L A R R C A N C D T T S T P L W R N G P R
gm003143_Glyma0    N N - - - - - - N N I T Q S Q S K S S S R G S N - - - - - - - - - N N N D S L L A R R C A N C D T T S T P L W R N G P R
 
AT3G50870.1     G P K S L C N A C G I R F K K E E R R T T A A T G N T V V G A A P V Q T D Q - - - - Y G H H N S G Y N N Y H A A T N N N
gm003143_Glyma0    G P K S L C N A C G I R F K K E Q R R A S A A G A T S A S A A V P G G A M E S A R V Y G H H - - - - - - - - - - - - - H
 
AT3G50870.1     N N N G T P W A H H H S T Q R V P C N Y P A N E I R F M D D Y G S G V A N N V E S D G A H G G V P F L S W R L N V A D R
gm003143_Glyma0    N N S - - - W Y A H S Q S Q K M - - - - M G N E L R F M D D - - - - - S D D R D S D - - N N G I P F L S W K L N I P D R
 
AT3G50870.1     A S L V H D F T R
gm003143_Glyma0    T S L - - - - - -
 
0