fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G51080.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt001424 not found in 333aa AT5G66320.2 1st_not 0.413793103 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G51080.1     MESVELTLKNSNMKDKTLTGGAQ-----------NG---DDFSVDDLLDFSKEEEDDDVL
pt001424_POPTR_ MERVEGALKTSFRKEMAVKFSPQVLDDFWPVNVTNGMSSDDFSVDELLDFSNE----NGF
                ** ** :**.*  *: ::. ..*           **   ******:*****:*    : :

AT3G51080.1     VEDEAE---LKVQRKRGVSDENTLHRSNDFS-----TADF---HTSGLSVPMDDIAELEW
pt001424_POPTR_ IEDEENPCVVSVSHKQETLKED---KNNDRSPYFAVKEDFVSGPTSELCVPTDDLASLEW
                :*** :   :.*.:*: . .*:   :.** *     . **    ** *.** **:*.***

AT3G51080.1     LSNFVDDSSFTPYSAP----TNKPVWLTGNRRHLVQPVKE-----------ETCFKSQHP
pt001424_POPTR_ LSHFVEDSN-SEYAAPFPAIVSPP-----------EPEKENFAEQEKSVLTEPCFKTPVP
                **:**:**. : *:**    .. *           :* **           *.***:  *

AT3G51080.1     AVKTRPKRARTGVRVWSHGSQSLTDSSSSSTTSSSSSPRPSSPLWL--------ASGQFL
pt001424_POPTR_ A-KARSKRTRTGVRVWPLGSPTLTESSTSSSSSTSSS-SPSSP-WLIHTKPLLNAEPLWF
                * *:*.**:*******. ** :**:**:**::*:***  **** **        *.  ::

AT3G51080.1     DEPMTKTQKKKKVWKNAGQTQTQTQTQTRQCGHCGVQKTPQWRAGPLGAKTLCNACGVRY
pt001424_POPTR_ EKPVVKRMKKKPSFHAAASGGGGGSHSSRRCSHCGIQKTPQWRAGPNGSKTLCNACGVRY
                ::*:.*  ***  :: *..     . .:*:*.***:********** *:***********

AT3G51080.1     KSGRLLPEYRPACSPTFSSELHSNHHSKVIEMRRKKETSDGAEETGLNQPVQTVQVVSSF
pt001424_POPTR_ KSGRLLPEYRPACSPTFSKELHSNHHRKVLEMRRKKEIL-GQTEPGLVQPVVPSCV----
                ******************.******* **:*******   *  *.** *** .  *
BoxShade v3.31 C (beta, 970507) Output
AT3G51080.1     M E S V E L T L K N S N M K D K T L T G G A Q - - - - - - - - - - - N G - - - D D F S V D D L L D F S K E E E D D D V L
pt001424_POPTR_    M E R V E G A L K T S F R K E M A V K F S P Q V L D D F W P V N V T N G M S S D D F S V D E L L D F S N E - - - - N G F
 
AT3G51080.1     V E D E A E - - - L K V Q R K R G V S D E N T L H R S N D F S - - - - - T A D F - - - H T S G L S V P M D D I A E L E W
pt001424_POPTR_    I E D E E N P C V V S V S H K Q E T L K E D - - - K N N D R S P Y F A V K E D F V S G P T S E L C V P T D D L A S L E W
 
AT3G51080.1     L S N F V D D S S F T P Y S A P - - - - T N K P V W L T G N R R H L V Q P V K E - - - - - - - - - - - E T C F K S Q H P
pt001424_POPTR_    L S H F V E D S N - S E Y A A P F P A I V S P P - - - - - - - - - - - E P E K E N F A E Q E K S V L T E P C F K T P V P
 
AT3G51080.1     A V K T R P K R A R T G V R V W S H G S Q S L T D S S S S S T T S S S S S P R P S S P L W L - - - - - - - - A S G Q F L
pt001424_POPTR_    A - K A R S K R T R T G V R V W P L G S P T L T E S S T S S S S S T S S S - S P S S P - W L I H T K P L L N A E P L W F
 
AT3G51080.1     D E P M T K T Q K K K K V W K N A G Q T Q T Q T Q T Q T R Q C G H C G V Q K T P Q W R A G P L G A K T L C N A C G V R Y
pt001424_POPTR_    E K P V V K R M K K K P S F H A A A S G G G G G S H S S R R C S H C G I Q K T P Q W R A G P N G S K T L C N A C G V R Y
 
AT3G51080.1     K S G R L L P E Y R P A C S P T F S S E L H S N H H S K V I E M R R K K E T S D G A E E T G L N Q P V Q T V Q V V S S F
pt001424_POPTR_    K S G R L L P E Y R P A C S P T F S K E L H S N H H R K V L E M R R K K E I L - G Q T E P G L V Q P V V P S C V - - - -
 
0