fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G52440.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os004856 not found in 329aa AT3G52440.1 1st_1st 0.264413518 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G52440.1     MERAEALTSS-------FIWRPNA-------NANAEITPSCPRCGSSNTKFCYYNNYSLT
Os004856_Os01t0 -----MLSSSHHEAMLPYAPRPPSLLVDRRYKQGAEAAPNCPRCDSPNTKFCYYNNYSLS
                      *:**       :  ** :       : .** :*.****.*.************:

AT3G52440.1     QPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRPKSSSGNNTKTS---------------
Os004856_Os01t0 QPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGKSSSSARSAADAVSSGRDAAFGHRFP
                ******************************.** ****. .: :.               

AT3G52440.1     -----------LTANSGNPGGGSP---------SIDLALVYANFLNPKP-----------
Os004856_Os01t0 GPVRPDMVLEGMVGNPANPGQAMPDVAAAADGSTIDLAMLYAKFLNHPPTDAGLGAVTPE
                           :..*..*** . *         :****::**:***  *           

AT3G52440.1     -----DESI--LQENCDL-------ATTDF--------------LVDNPTGTSMDPSWSM
Os004856_Os01t0 SGGHVDEAFDTFSASSDLSPGILAAASAQFDPNQDGFGEWSSPASGNDPTSTATTATTSM
                     **::  :. ..**       *:::*                ::**.*:  .: **

AT3G52440.1     DINDGHHDHYINPVEHIVEECGYN--GLPP-FPGEELLS-----LDTNGVWSDALLIGHN
Os004856_Os01t0 LCTDASVQAALGELNFAMDQSCFDSLGLPTDVAGAGSLSSWCSIVPSLSTWEEP---KYD
                  .*.  :  :. ::. :::. ::  ***. ..*   **     : : ..*.:.    ::

AT3G52440.1     HVDVGVTPVQAVHEPVVHFADESNDSTNLLFGSWSPFDFTADG---------
Os004856_Os01t0 SLDSFPDDAMSLHECMIGAPDH---------------DWSVDCQGLEALYMP
                 :*     . ::** ::  .*.               *::.*
BoxShade v3.31 C (beta, 970507) Output
AT3G52440.1     M E R A E A L T S S - - - - - - - F I W R P N A - - - - - - - N A N A E I T P S C P R C G S S N T K F C Y Y N N Y S L T
Os004856_Os01t0    - - - - - M L S S S H H E A M L P Y A P R P P S L L V D R R Y K Q G A E A A P N C P R C D S P N T K F C Y Y N N Y S L S
 
AT3G52440.1     Q P R Y F C K G C R R Y W T K G G S L R N V P V G G G C R K S R R P K S S S G N N T K T S - - - - - - - - - - - - - - -
Os004856_Os01t0    Q P R Y F C K G C R R Y W T K G G S L R N V P V G G G C R K N R R G K S S S S A R S A A D A V S S G R D A A F G H R F P
 
AT3G52440.1     - - - - - - - - - - - L T A N S G N P G G G S P - - - - - - - - - S I D L A L V Y A N F L N P K P - - - - - - - - - - -
Os004856_Os01t0    G P V R P D M V L E G M V G N P A N P G Q A M P D V A A A A D G S T I D L A M L Y A K F L N H P P T D A G L G A V T P E
 
AT3G52440.1     - - - - - D E S I - - L Q E N C D L - - - - - - - A T T D F - - - - - - - - - - - - - - L V D N P T G T S M D P S W S M
Os004856_Os01t0    S G G H V D E A F D T F S A S S D L S P G I L A A A S A Q F D P N Q D G F G E W S S P A S G N D P T S T A T T A T T S M
 
AT3G52440.1     D I N D G H H D H Y I N P V E H I V E E C G Y N - - G L P P - F P G E E L L S - - - - - L D T N G V W S D A L L I G H N
Os004856_Os01t0    L C T D A S V Q A A L G E L N F A M D Q S C F D S L G L P T D V A G A G S L S S W C S I V P S L S T W E E P - - - K Y D
 
AT3G52440.1     H V D V G V T P V Q A V H E P V V H F A D E S N D S T N L L F G S W S P F D F T A D G - - - - - - - - -
Os004856_Os01t0    S L D S F P D D A M S L H E C M I G A P D H - - - - - - - - - - - - - - - D W S V D C Q G L E A L Y M P
 
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