fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G52440.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm004493 not found in 209aa AT3G52440.1 1st_1st 0.347912524 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G52440.1     MERAEALTSSFIWRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWT
gm004493_Glyma0 MESG--------WKP----EVEMSPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWT
                ** .        *:*    :.*::*.**********************************

AT3G52440.1     KGGSLRNVPVGGGCRKSRRPKSSSGNNT--KTSLTANSGNPGGGSPSIDLALVYANFLNP
gm004493_Glyma0 KGGSLRNVPVGGGCKKNRR-----GNKTLLRQSIDVTDG------PNIDLALVFANFLNQ
                **************:*.**     **:*  : *: ...*      *.******:***** 

AT3G52440.1     KPDESILQENCDLATTDFLVDNPTGTSMDPSWSMDINDGHHDHYINPVEHIVEECGYNG-
gm004493_Glyma0 KPNSS-EENNSRLSNTDVV-----GPSTLP----------------------EELGLTGS
                **:.*  ::*. *:.**.:     *.*  *                      ** * .* 

AT3G52440.1     --------------LPPFPGEELLSLDTNGVWSDA-LLIGHNHVDVGVTPVQAVHEPVVH
gm004493_Glyma0 TLCRHFKKMELSNTLPPLPGEGEASHDHHMMWSNSEMMINHHAFQVTQPPLLGLE---VH
                              ***:***   * * : :**:: ::*.*: .:*  .*: .:.   **

AT3G52440.1     FADESNDSTNLLFGSWSPFDFTADG-----
gm004493_Glyma0 DAD-------LLIGNWSPFDSPKDTSFSRP
                 **       **:*.***** . *
BoxShade v3.31 C (beta, 970507) Output
AT3G52440.1     M E R A E A L T S S F I W R P N A N A N A E I T P S C P R C G S S N T K F C Y Y N N Y S L T Q P R Y F C K G C R R Y W T
gm004493_Glyma0    M E S G - - - - - - - - W K P - - - - E V E M S P N C P R C G S S N T K F C Y Y N N Y S L T Q P R Y F C K G C R R Y W T
 
AT3G52440.1     K G G S L R N V P V G G G C R K S R R P K S S S G N N T - - K T S L T A N S G N P G G G S P S I D L A L V Y A N F L N P
gm004493_Glyma0    K G G S L R N V P V G G G C K K N R R - - - - - G N K T L L R Q S I D V T D G - - - - - - P N I D L A L V F A N F L N Q
 
AT3G52440.1     K P D E S I L Q E N C D L A T T D F L V D N P T G T S M D P S W S M D I N D G H H D H Y I N P V E H I V E E C G Y N G -
gm004493_Glyma0    K P N S S - E E N N S R L S N T D V V - - - - - G P S T L P - - - - - - - - - - - - - - - - - - - - - - E E L G L T G S
 
AT3G52440.1     - - - - - - - - - - - - - - L P P F P G E E L L S L D T N G V W S D A - L L I G H N H V D V G V T P V Q A V H E P V V H
gm004493_Glyma0    T L C R H F K K M E L S N T L P P L P G E G E A S H D H H M M W S N S E M M I N H H A F Q V T Q P P L L G L E - - - V H
 
AT3G52440.1     F A D E S N D S T N L L F G S W S P F D F T A D G - - - - -
gm004493_Glyma0    D A D - - - - - - - L L I G N W S P F D S P K D T S F S R P
 
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