fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G52525.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm004525 not found in 169aa AT2G36026.1 1st_not 0.464419475 II
Gm027105 not found in 177aa AT2G36026.1 not_not 0.456928838 III
Gm007629 not found in 190aa AT2G36026.1 not_not 0.408239700 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G52525.1     MATKSKKKILKTVSVVDISCGNCIKPT-FASIFNFFSKKPK--RPSSTYR-HCHSSISSA
gm007629_Glyma0 MSGSRKKLLLNTVS-VKLGCGTCRRPS-LRRIFH-PKPKPKNLNNNTNYRKHKHSSSSSA
gm004525_Glyma0 MSSSRKKLVLNTVS-VSLGCGSCRRPGLLRHIFH-PKRRPK----KPAYQAH--------
gm027105_Glyma1 MSSSRKKLVLNTVS-VSLGCGSCRRPRLLRHIFH-PKQRPK----KPAGQVH--------
                *: . ** :*:*** *.:.**.* :*  :  **:  . :**    ..  : *        

AT3G52525.1     ------------TPSSTPLATAS-----------------------------------VA
gm007629_Glyma0 SSSFFASQWGGDSTSATPTNTNT--TFSP-YVD-SSHFSDSDSYVKAVGGLGRAGKEGVA
gm004525_Glyma0 -----GFHWDDTATSSSTTNASTAATFSPCYAEASAQFSN-------YG-------RGVA
gm027105_Glyma1 -----GLHWDDTTTSSTTTNASTAATFSPCYAEASAQFSDFAETAKAFG-------RGVA
                            :.*::.  : :                                   **

AT3G52525.1     VEKDSDDPYLDFRQSMLQMILENQIYSKDELRELLQCFLSLNSHYHHGIIVRAFSEIWED
gm007629_Glyma0 VEKDSDDPYLDFRHSMLQMILENEIYSKQDLRELLNCFLQLNSPHHHGVIVRAFTEIWNG
gm004525_Glyma0 VEKDSDDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNSPDHHGVIVRAFTEIWNG
gm027105_Glyma1 VEKDSDDPYLDFRHSMLQMILENEIYSKEDLRELLNCFLQLNSPDHHGVIVRAFTEIWNG
                *************:*********:****::*****:***.***  ***:*****:***:.

AT3G52525.1     VSSA-AASAVEASPLITRHVSRASRDYYNYY
gm007629_Glyma0 VFSV--RSSS--------HIHLKPREF----
gm004525_Glyma0 VFSV-RRSGSSTG----FHLNRKSRDF----
gm027105_Glyma1 VFSVRRRSGSSTG----FHLNRKSRDF----
                * *.   *.         *:   .*::
BoxShade v3.31 C (beta, 970507) Output
AT3G52525.1     M A T K S K K K I L K T V S V V D I S C G N C I K P T - F A S I F N F F S K K P K - - R P S S T Y R - H C H S S I S S A
gm007629_Glyma0    M S G S R K K L L L N T V S - V K L G C G T C R R P S - L R R I F H - P K P K P K N L N N N T N Y R K H K H S S S S S A
gm004525_Glyma0    M S S S R K K L V L N T V S - V S L G C G S C R R P G L L R H I F H - P K R R P K - - - - K P A Y Q A H - - - - - - - -
gm027105_Glyma1    M S S S R K K L V L N T V S - V S L G C G S C R R P R L L R H I F H - P K Q R P K - - - - K P A G Q V H - - - - - - - -
 
AT3G52525.1     - - - - - - - - - - - - T P S S T P L A T A S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V A
gm007629_Glyma0    S S S F F A S Q W G G D S T S A T P T N T N T - - T F S P - Y V D - S S H F S D S D S Y V K A V G G L G R A G K E G V A
gm004525_Glyma0    - - - - - G F H W D D T A T S S S T T N A S T A A T F S P C Y A E A S A Q F S N - - - - - - - Y G - - - - - - - R G V A
gm027105_Glyma1    - - - - - G L H W D D T T T S S T T T N A S T A A T F S P C Y A E A S A Q F S D F A E T A K A F G - - - - - - - R G V A
 
AT3G52525.1     V E K D S D D P Y L D F R Q S M L Q M I L E N Q I Y S K D E L R E L L Q C F L S L N S H Y H H G I I V R A F S E I W E D
gm007629_Glyma0    V E K D S D D P Y L D F R H S M L Q M I L E N E I Y S K Q D L R E L L N C F L Q L N S P H H H G V I V R A F T E I W N G
gm004525_Glyma0    V E K D S D D P Y L D F R H S M L Q M I L E N E I Y S K D D L R E L L N C F L Q L N S P D H H G V I V R A F T E I W N G
gm027105_Glyma1    V E K D S D D P Y L D F R H S M L Q M I L E N E I Y S K E D L R E L L N C F L Q L N S P D H H G V I V R A F T E I W N G
 
AT3G52525.1     V S S A - A A S A V E A S P L I T R H V S R A S R D Y Y N Y Y
gm007629_Glyma0    V F S V - - R S S S - - - - - - - - H I H L K P R E F - - - -
gm004525_Glyma0    V F S V - R R S G S S T G - - - - F H L N R K S R D F - - - -
gm027105_Glyma1    V F S V R R R S G S S T G - - - - F H L N R K S R D F - - - -
 
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