fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G52910.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm007546 not found in 363aa AT2G36400.1 1st_not 0.478599221 II
Pt006632 not found in 377aa AT2G36400.1 1st_not 0.478599221 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G52910.1     MDLQLKQWRSQQQNESEEQGSAATKISNFFFDQIQ-SQTATSAAAAPLPLFVPEPTSSSS
gm007546_Glyma0 MDFHLKQWRNQH--ESEEQHS--TKMPKLLPESHQ-QQQPSAS---ALPLFVPEPNSSKV
pt006632_POPTR_ MDFHLKQWRNQHE-ESGQQPS--AKMPKLLMDPHQPQQHPHSSGSAAFPLFLPEPSCKNS
                **::*****.*:  ** :* *  :*:.::: :  * .* . ::   .:***:***.... 

AT3G52910.1     FSCFSPDSSNSSSSSRFLK-MGNFFSWAQWQELELQALIYRYMLAGASVPQELLLPIKKS
gm007546_Glyma0 STLLFPR-------------MGSYFSLSQWQELELQALIFRYMLAGAAVPPELLQPIKKS
pt006632_POPTR_ NLSAFPDS-NTAANTRLPKIMGNYFSLEQWQELELQALIYRFMLAGAAIPPELLQPIKKT
                     *              **.:**  ***********:*:*****::* *** ****:

AT3G52910.1     LLHQ-SPMHFLHHPLQHSFPHHQPS-WYWGRGAMDPEPGRCKRTDGKKWRCSRDVVAGHK
gm007546_Glyma0 LLHS--PHYYLHHPLQ----HYQPSAWYWGRGAMDPEPGRCRRTDGKKWRCSRDVVAGQK
pt006632_POPTR_ LLHSHPPPYFLHHPLQLHCSYYQPS-WYWGRAAMDPEPGRCRRTDGKKWRCSRDVVAGHK
                ***.  * ::******    ::*** *****.*********:****************:*

AT3G52910.1     YCDRHIHRGRNRSRKPVETATTTITTTATTTASSFVLG-EELGHGPNN------NHFFSS
gm007546_Glyma0 YCERHMHRGRNRSRKPVELPTPTSAIN-NCG----VTGVGSLGPGASS-SSICSPPLASA
pt006632_POPTR_ YCERHLHRGRNRSRKPVENPTPTISTNITC------IGIGELDQTTFSLFCFCFNLLA--
                **:**:************ .*.* : . .        *  .*.  . .        :   

AT3G52910.1     GSSQPLHLSHQQSCSSEMKQESNNNKRPYEANSGFSNGRSDDGHILRHFFDDWPRS---S
gm007546_Glyma0 SFKSPFDL-HLDERSSGTKNEDEDHVGGDGRSGG---GG---GHMLRHFFDDWPRSLQDS
pt006632_POPTR_ ---HPY---------CSSKTESKGLIGPPPPNEV---GNRSDGHILWHFFDDWPRSVDES
                    *          .  * *.:.       .     *    **:* *********   *

AT3G52910.1     DSTS------SPMSSSTCHLSISMPGNNTSSDVSLKLST--------GNEEEEENMRNNN
gm007546_Glyma0 DNVENNAAAGRS-------LSISMPGAS--SDVSLKLSTGYGEDSGPGNENVSL------
pt006632_POPTR_ DNMN----AGSSMNSLTC-LSVSMPGNSPASDVSLKLST--------GNNIAEE------
                *. .       .       **:**** .  *********        **:  .       

AT3G52910.1     NEREQM----------NW----WSNG-GNH-HNNMGGPLAEALRSASSTSSVLHQMGIST
gm007546_Glyma0 -EPEQLQL--------NW-AGGWAS--SNQ-VASMGGPLAEALRSSTST-------SSPT
pt006632_POPTR_ -EPEPVPAPIPRGNTSNWAAAGWGTKITNQVVTSMGGPLAEALRSSTTKL-ISHECSAPV
                 * * :          **    *..   *:   .***********:::.       . ..

AT3G52910.1     QVFH--------------
gm007546_Glyma0 SVLHRHLPRGSETSFIST
pt006632_POPTR_ MSPH---------CF---
                   *
BoxShade v3.31 C (beta, 970507) Output
AT3G52910.1     M D L Q L K Q W R S Q Q Q N E S E E Q G S A A T K I S N F F F D Q I Q - S Q T A T S A A A A P L P L F V P E P T S S S S
gm007546_Glyma0    M D F H L K Q W R N Q H - - E S E E Q H S - - T K M P K L L P E S H Q - Q Q Q P S A S - - - A L P L F V P E P N S S K V
pt006632_POPTR_    M D F H L K Q W R N Q H E - E S G Q Q P S - - A K M P K L L M D P H Q P Q Q H P H S S G S A A F P L F L P E P S C K N S
 
AT3G52910.1     F S C F S P D S S N S S S S S R F L K - M G N F F S W A Q W Q E L E L Q A L I Y R Y M L A G A S V P Q E L L L P I K K S
gm007546_Glyma0    S T L L F P R - - - - - - - - - - - - - M G S Y F S L S Q W Q E L E L Q A L I F R Y M L A G A A V P P E L L Q P I K K S
pt006632_POPTR_    N L S A F P D S - N T A A N T R L P K I M G N Y F S L E Q W Q E L E L Q A L I Y R F M L A G A A I P P E L L Q P I K K T
 
AT3G52910.1     L L H Q - S P M H F L H H P L Q H S F P H H Q P S - W Y W G R G A M D P E P G R C K R T D G K K W R C S R D V V A G H K
gm007546_Glyma0    L L H S - - P H Y Y L H H P L Q - - - - H Y Q P S A W Y W G R G A M D P E P G R C R R T D G K K W R C S R D V V A G Q K
pt006632_POPTR_    L L H S H P P P Y F L H H P L Q L H C S Y Y Q P S - W Y W G R A A M D P E P G R C R R T D G K K W R C S R D V V A G H K
 
AT3G52910.1     Y C D R H I H R G R N R S R K P V E T A T T T I T T T A T T T A S S F V L G - E E L G H G P N N - - - - - - N H F F S S
gm007546_Glyma0    Y C E R H M H R G R N R S R K P V E L P T P T S A I N - N C G - - - - V T G V G S L G P G A S S - S S I C S P P L A S A
pt006632_POPTR_    Y C E R H L H R G R N R S R K P V E N P T P T I S T N I T C - - - - - - I G I G E L D Q T T F S L F C F C F N L L A - -
 
AT3G52910.1     G S S Q P L H L S H Q Q S C S S E M K Q E S N N N K R P Y E A N S G F S N G R S D D G H I L R H F F D D W P R S - - - S
gm007546_Glyma0    S F K S P F D L - H L D E R S S G T K N E D E D H V G G D G R S G G - - - G G - - - G H M L R H F F D D W P R S L Q D S
pt006632_POPTR_    - - - H P Y - - - - - - - - - C S S K T E S K G L I G P P P P N E V - - - G N R S D G H I L W H F F D D W P R S V D E S
 
AT3G52910.1     D S T S - - - - - - S P M S S S T C H L S I S M P G N N T S S D V S L K L S T - - - - - - - - G N E E E E E N M R N N N
gm007546_Glyma0    D N V E N N A A A G R S - - - - - - - L S I S M P G A S - - S D V S L K L S T G Y G E D S G P G N E N V S L - - - - - -
pt006632_POPTR_    D N M N - - - - A G S S M N S L T C - L S V S M P G N S P A S D V S L K L S T - - - - - - - - G N N I A E E - - - - - -
 
AT3G52910.1     N E R E Q M - - - - - - - - - - N W - - - - W S N G - G N H - H N N M G G P L A E A L R S A S S T S S V L H Q M G I S T
gm007546_Glyma0    - E P E Q L Q L - - - - - - - - N W - A G G W A S - - S N Q - V A S M G G P L A E A L R S S T S T - - - - - - - S S P T
pt006632_POPTR_    - E P E P V P A P I P R G N T S N W A A A G W G T K I T N Q V V T S M G G P L A E A L R S S T T K L - I S H E C S A P V
 
AT3G52910.1     Q V F H - - - - - - - - - - - - - -
gm007546_Glyma0    S V L H R H L P R G S E T S F I S T
pt006632_POPTR_    M S P H - - - - - - - - - C F - - -
 
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