fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G52910.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt006632 not found in 377aa AT2G36400.1 1st_not 0.478599221 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G52910.1     MDLQLKQWRSQQQNESEEQGSAATKISNFFFDQIQSQT-ATSAAAAPLPLFVPEPT-SSS
pt006632_POPTR_ MDFHLKQWRNQHE-ESGQQPSA--KMPKLLMDPHQPQQHPHSSGSAAFPLFLPEPSCKNS
                **::*****.*:: ** :* **  *:.::::*  *.*  . *:.:*.:***:***: ..*

AT3G52910.1     SFSCFSPDSSNSSSSSRFLK-MGNFFSWAQWQELELQALIYRYMLAGASVPQELLLPIKK
pt006632_POPTR_ NLSAF-PD-SNTAANTRLPKIMGNYFSLEQWQELELQALIYRFMLAGAAIPPELLQPIKK
                .:*.* ** **:::.:*: * ***:**  *************:*****::* *** ****

AT3G52910.1     SLLH-QSPMHFLHHPLQHSFPHHQPSWYWGRGAMDPEPGRCKRTDGKKWRCSRDVVAGHK
pt006632_POPTR_ TLLHSHPPPYFLHHPLQLHCSYYQPSWYWGRAAMDPEPGRCRRTDGKKWRCSRDVVAGHK
                :*** :.* :*******   .::********.*********:******************

AT3G52910.1     YCDRHIHRGRNRSRKPVETATTTITTTAT---------TTASSFVLGEELGHGPNNNHFF
pt006632_POPTR_ YCERHLHRGRNRSRKPVENPTPTISTNITCIGIGELDQTTFSLFCFCFNL----------
                **:**:************..*.**:*. *         ** * * :  :*          

AT3G52910.1     SSGSSQPLHLSHQQSCSSEMKQESNNNKRPYEANSGFSNGRSDDGHILRHFFDDWPRSSD
pt006632_POPTR_ ---------LAHPY-CSS--KTESKGLIGPPPPN---EVGNRSDGHILWHFFDDWPRSVD
                         *:*   ***  * **:.   *  .*   . *. .***** ********* *

AT3G52910.1     STS-----SPMSSSTCHLSISMPGNNTSSDVSLKLSTGN---EEEEENM-----RNNNNE
pt006632_POPTR_ ESDNMNAGSSMNSLTC-LSVSMPGNSPASDVSLKLSTGNNIAEEEPEPVPAPIPRGNTS-
                .:.     *.*.* ** **:*****..:***********   *** * :     *.*.. 

AT3G52910.1     REQMNWWSNG-GNHHNN-----MGGPLAEALRSASSTSSVLHQMGISTQVFH--
pt006632_POPTR_ ----NWAAAGWGTKITNQVVTSMGGPLAEALRS-STTKLISHECSAPVMSPHCF
                    ** : * *.: .*     *********** *:*. : *: . ..   *
BoxShade v3.31 C (beta, 970507) Output
AT3G52910.1     M D L Q L K Q W R S Q Q Q N E S E E Q G S A A T K I S N F F F D Q I Q S Q T - A T S A A A A P L P L F V P E P T - S S S
pt006632_POPTR_    M D F H L K Q W R N Q H E - E S G Q Q P S A - - K M P K L L M D P H Q P Q Q H P H S S G S A A F P L F L P E P S C K N S
 
AT3G52910.1     S F S C F S P D S S N S S S S S R F L K - M G N F F S W A Q W Q E L E L Q A L I Y R Y M L A G A S V P Q E L L L P I K K
pt006632_POPTR_    N L S A F - P D - S N T A A N T R L P K I M G N Y F S L E Q W Q E L E L Q A L I Y R F M L A G A A I P P E L L Q P I K K
 
AT3G52910.1     S L L H - Q S P M H F L H H P L Q H S F P H H Q P S W Y W G R G A M D P E P G R C K R T D G K K W R C S R D V V A G H K
pt006632_POPTR_    T L L H S H P P P Y F L H H P L Q L H C S Y Y Q P S W Y W G R A A M D P E P G R C R R T D G K K W R C S R D V V A G H K
 
AT3G52910.1     Y C D R H I H R G R N R S R K P V E T A T T T I T T T A T - - - - - - - - - T T A S S F V L G E E L G H G P N N N H F F
pt006632_POPTR_    Y C E R H L H R G R N R S R K P V E N P T P T I S T N I T C I G I G E L D Q T T F S L F C F C F N L - - - - - - - - - -
 
AT3G52910.1     S S G S S Q P L H L S H Q Q S C S S E M K Q E S N N N K R P Y E A N S G F S N G R S D D G H I L R H F F D D W P R S S D
pt006632_POPTR_    - - - - - - - - - L A H P Y - C S S - - K T E S K G L I G P P P P N - - - E V G N R S D G H I L W H F F D D W P R S V D
 
AT3G52910.1     S T S - - - - - S P M S S S T C H L S I S M P G N N T S S D V S L K L S T G N - - - E E E E E N M - - - - - R N N N N E
pt006632_POPTR_    E S D N M N A G S S M N S L T C - L S V S M P G N S P A S D V S L K L S T G N N I A E E E P E P V P A P I P R G N T S -
 
AT3G52910.1     R E Q M N W W S N G - G N H H N N - - - - - M G G P L A E A L R S A S S T S S V L H Q M G I S T Q V F H - -
pt006632_POPTR_    - - - - N W A A A G W G T K I T N Q V V T S M G G P L A E A L R S - S T T K L I S H E C S A P V M S P H C F
 
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