fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G53200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm026931 not found in 232aa AT3G53200.1 1st_1st 0.385593220 Ib
Pt004914 not found in 234aa AT3G53200.1 1st_1st 0.396186440 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G53200.1     MDFKKEETLRRGPWLEEEDERLVKVISLLGERRWDSLAIVSGLKRSGKSCRLRWMNYLNP
pt004914_POPTR_ -MACQGDKLRKGSWQEEEDERLTASATLLGERKWDSIARLSGLMRSGKSCRMRWLNYLQP
gm026931_Glyma1 ---MQGEHLRKGTWLQEEDEQLTSFVTRLGERRWDSLAKVAGLKRSGKSCRLRWMNYLRP
                    : : **:*.* :****:*.   : ****:***:* ::** *******:**:***.*

AT3G53200.1     TLKRGPMSQEEERIIFQLHALWGNKWSKIARRLPGRTDNEIKNYWRTHYRKKQEAQNYGK
pt004914_POPTR_ NLKRGHISAEEEQIIIQFHGQWGNKWARIARRLPGRTDNEIKNYWRTHMRKEIQTEE-EG
gm026931_Glyma1 NLKHGHFSVEEEQLIVQLQQQLGNKWAKIARKLPGRTDNEIKNFWRTHLRNRAQAQQVPG
                .**:* :* ***::*.*::   ****::***:***********:**** *:. ::::   

AT3G53200.1     LFEWRGNTG-EELLHK--------YKETEITRTKTTSQEHGFVEVVSMESGKEANGGVGG
pt004914_POPTR_ NFQPKVYSAKPELL----------YQNGD----STSAWKYSIRDYNSVDD----NIGPAG
gm026931_Glyma1 DFKYKLEIATEEVNQKSIDMDSKDYKHGNVC-CQDSEWE--TKD---------------G
                 *: :   .  *:           *:. :    . :  :    :               *

AT3G53200.1     RE-------SFGVMKSPYENRISDWISEISTDQSEANLSED-HSSNSCS-----ENNINI
pt004914_POPTR_ SSLEHYELPSLTHMNSPYETRQYDWIPKLSNDQSQTEVHGEGNGLDWCF----------C
gm026931_Glyma1 SSIHTLPLSDWELGSSPYETRILDWIAELQNGYGDKELEQDCNSTGTCNNYSPQEFDEGC
                 .       .    .****.*  ***.::... .: ::  : :. . *            

AT3G53200.1     GTWWFQETRDFEEFS--CSLWS--
pt004914_POPTR_ DPAWNSEDSDISTLVSLGSLWDMN
gm026931_Glyma1 D-SWDYS----------GSLWDMN
                .  *  .           ***.
BoxShade v3.31 C (beta, 970507) Output
AT3G53200.1     M D F K K E E T L R R G P W L E E E D E R L V K V I S L L G E R R W D S L A I V S G L K R S G K S C R L R W M N Y L N P
pt004914_POPTR_    - M A C Q G D K L R K G S W Q E E E D E R L T A S A T L L G E R K W D S I A R L S G L M R S G K S C R M R W L N Y L Q P
gm026931_Glyma1    - - - M Q G E H L R K G T W L Q E E D E Q L T S F V T R L G E R R W D S L A K V A G L K R S G K S C R L R W M N Y L R P
 
AT3G53200.1     T L K R G P M S Q E E E R I I F Q L H A L W G N K W S K I A R R L P G R T D N E I K N Y W R T H Y R K K Q E A Q N Y G K
pt004914_POPTR_    N L K R G H I S A E E E Q I I I Q F H G Q W G N K W A R I A R R L P G R T D N E I K N Y W R T H M R K E I Q T E E - E G
gm026931_Glyma1    N L K H G H F S V E E E Q L I V Q L Q Q Q L G N K W A K I A R K L P G R T D N E I K N F W R T H L R N R A Q A Q Q V P G
 
AT3G53200.1     L F E W R G N T G - E E L L H K - - - - - - - - Y K E T E I T R T K T T S Q E H G F V E V V S M E S G K E A N G G V G G
pt004914_POPTR_    N F Q P K V Y S A K P E L L - - - - - - - - - - Y Q N G D - - - - S T S A W K Y S I R D Y N S V D D - - - - N I G P A G
gm026931_Glyma1    D F K Y K L E I A T E E V N Q K S I D M D S K D Y K H G N V C - C Q D S E W E - - T K D - - - - - - - - - - - - - - - G
 
AT3G53200.1     R E - - - - - - - S F G V M K S P Y E N R I S D W I S E I S T D Q S E A N L S E D - H S S N S C S - - - - - E N N I N I
pt004914_POPTR_    S S L E H Y E L P S L T H M N S P Y E T R Q Y D W I P K L S N D Q S Q T E V H G E G N G L D W C F - - - - - - - - - - C
gm026931_Glyma1    S S I H T L P L S D W E L G S S P Y E T R I L D W I A E L Q N G Y G D K E L E Q D C N S T G T C N N Y S P Q E F D E G C
 
AT3G53200.1     G T W W F Q E T R D F E E F S - - C S L W S - -
pt004914_POPTR_    D P A W N S E D S D I S T L V S L G S L W D M N
gm026931_Glyma1    D - S W D Y S - - - - - - - - - - G S L W D M N
 
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