fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G53200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt004914 not found in 234aa AT3G53200.1 1st_1st 0.396186440 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G53200.1     MDFKKEETLRRGPWLEEEDERLVKVISLLGERRWDSLAIVSGLKRSGKSCRLRWMNYLNP
pt004914_POPTR_ MACQGDK-LRKGSWQEEEDERLTASATLLGERKWDSIARLSGLMRSGKSCRMRWLNYLQP
                *  : :: **:*.* *******.   :*****:***:* :*** *******:**:***:*

AT3G53200.1     TLKRGPMSQEEERIIFQLHALWGNKWSKIARRLPGRTDNEIKNYWRTHYRKKQEAQNYGK
pt004914_POPTR_ NLKRGHISAEEEQIIIQFHGQWGNKWARIARRLPGRTDNEIKNYWRTHMRKEIQTEEEGN
                .**** :* ***:**:*:*. *****::******************** **: :::: *:

AT3G53200.1     LFEWRGNTGEELLHKYKETEITRTKTTSQEHGFVEVVSMESGKEANGGVGGRE-------
pt004914_POPTR_ FQPKVYSAKPELLYQNGDS------TSAWKYSIRDYNSVDD----NIGPAGSSLEHYELP
                :     .:  ***::  ::      *:: ::.: :  *::.    * * .* .       

AT3G53200.1     SFGVMKSPYENRISDWISEISTDQSEANLSEDHSSNSCSENNINIGTW------WFQETR
pt004914_POPTR_ SLTHMNSPYETRQYDWIPKLSNDQSQ---TEVHGEG----NGLD---WCFCDPAWNSEDS
                *:  *:****.*  ***.::*.***:   :* *...    *.::   *      * .*  

AT3G53200.1     DFEEFSC--SLWS--
pt004914_POPTR_ DISTLVSLGSLWDMN
                *:. : .  ***.
BoxShade v3.31 C (beta, 970507) Output
AT3G53200.1     M D F K K E E T L R R G P W L E E E D E R L V K V I S L L G E R R W D S L A I V S G L K R S G K S C R L R W M N Y L N P
pt004914_POPTR_    M A C Q G D K - L R K G S W Q E E E D E R L T A S A T L L G E R K W D S I A R L S G L M R S G K S C R M R W L N Y L Q P
 
AT3G53200.1     T L K R G P M S Q E E E R I I F Q L H A L W G N K W S K I A R R L P G R T D N E I K N Y W R T H Y R K K Q E A Q N Y G K
pt004914_POPTR_    N L K R G H I S A E E E Q I I I Q F H G Q W G N K W A R I A R R L P G R T D N E I K N Y W R T H M R K E I Q T E E E G N
 
AT3G53200.1     L F E W R G N T G E E L L H K Y K E T E I T R T K T T S Q E H G F V E V V S M E S G K E A N G G V G G R E - - - - - - -
pt004914_POPTR_    F Q P K V Y S A K P E L L Y Q N G D S - - - - - - T S A W K Y S I R D Y N S V D D - - - - N I G P A G S S L E H Y E L P
 
AT3G53200.1     S F G V M K S P Y E N R I S D W I S E I S T D Q S E A N L S E D H S S N S C S E N N I N I G T W - - - - - - W F Q E T R
pt004914_POPTR_    S L T H M N S P Y E T R Q Y D W I P K L S N D Q S Q - - - T E V H G E G - - - - N G L D - - - W C F C D P A W N S E D S
 
AT3G53200.1     D F E E F S C - - S L W S - -
pt004914_POPTR_    D I S T L V S L G S L W D M N
 
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