fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G53340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb008970 not found in 167aa AT3G53340.1 1st_1st 0.717741935 Ia
Gm007396 not found in 171aa AT3G53340.1 1st_1st 0.822580645 Ia
Pt043410 not found in 176aa AT3G53340.1 1st_1st 0.818548387 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G53340.1     MAESQTGGGGGGSHESGGDQSPRS-LNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKE
pt043410_POPTR_ MAAEAPASPGGGSHES-GDQSPRSNSNVREQDRFLPIANISRIMKKALPANGKIAKDAKE
Sb008970_Sorbi1 MADD------GGSHEGGGGGGGG--GGYREQDRFLPIANISRIMKKAVPANGKIAKDAKE
gm007396_Glyma0 -MADGPASPGGGSHES-GDHSPR--SNVREQDRYLPIANISRIMKKALPANGKIAKDAKE
                   .      *****. *. .     . *****:***********:.:* **********

AT3G53340.1     TMQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREM
pt043410_POPTR_ TVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLSRYREM
Sb008970_Sorbi1 TLQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYVEPLKIYLQKYREM
gm007396_Glyma0 TVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYMDPLKIYLTRYREM
                *:**********:*********:*********************:*::***:** :****

AT3G53340.1     EGDTKGSGKGGESSAKRD------GQPSQVSQFSQVPQQGSFSQG-PY--GNSQGSNMMV
pt043410_POPTR_ EGDTKGSAKTGDTSAKKD------IHPGPNAQIS---HQGSFSQGVSYGNSNSQAPHMMV
Sb008970_Sorbi1 EGDSKLSTKAGEGSIKKDAISSHGGTSSSSNQLV---QHGVYNQGMGY---------MQP
gm007396_Glyma0 EGDTKGSAKGGDSSAKRD------VQPSPNAQLA---HQGSFSQNVTY--PNSQGQHMMV
                ***:* * * *: * *:*        ..   *:    ::* :.*.  *         *  

AT3G53340.1     QMPGTE-
pt043410_POPTR_ PMQSNE-
Sb008970_Sorbi1 QYHNGDT
gm007396_Glyma0 PMQGPE-
                   . :
BoxShade v3.31 C (beta, 970507) Output
AT3G53340.1     M A E S Q T G G G G G G S H E S G G D Q S P R S - L N V R E Q D R F L P I A N I S R I M K R G L P L N G K I A K D A K E
pt043410_POPTR_    M A A E A P A S P G G G S H E S - G D Q S P R S N S N V R E Q D R F L P I A N I S R I M K K A L P A N G K I A K D A K E
Sb008970_Sorbi1    M A D D - - - - - - G G S H E G G G G G G G G - - G G Y R E Q D R F L P I A N I S R I M K K A V P A N G K I A K D A K E
gm007396_Glyma0    - M A D G P A S P G G G S H E S - G D H S P R - - S N V R E Q D R Y L P I A N I S R I M K K A L P A N G K I A K D A K E
 
AT3G53340.1     T M Q E C V S E F I S F V T S E A S D K C Q R E K R K T I N G D D L L W A M A T L G F E D Y I D P L K V Y L M R Y R E M
pt043410_POPTR_    T V Q E C V S E F I S F I T S E A S D K C Q R E K R K T I N G D D L L W A M A T L G F E D Y I D P L K I Y L S R Y R E M
Sb008970_Sorbi1    T L Q E C V S E F I S F V T S E A S D K C Q K E K R K T I N G D D L L W A M A T L G F E E Y V E P L K I Y L Q K Y R E M
gm007396_Glyma0    T V Q E C V S E F I S F I T S E A S D K C Q R E K R K T I N G D D L L W A M A T L G F E D Y M D P L K I Y L T R Y R E M
 
AT3G53340.1     E G D T K G S G K G G E S S A K R D - - - - - - G Q P S Q V S Q F S Q V P Q Q G S F S Q G - P Y - - G N S Q G S N M M V
pt043410_POPTR_    E G D T K G S A K T G D T S A K K D - - - - - - I H P G P N A Q I S - - - H Q G S F S Q G V S Y G N S N S Q A P H M M V
Sb008970_Sorbi1    E G D S K L S T K A G E G S I K K D A I S S H G G T S S S S N Q L V - - - Q H G V Y N Q G M G Y - - - - - - - - - M Q P
gm007396_Glyma0    E G D T K G S A K G G D S S A K R D - - - - - - V Q P S P N A Q L A - - - H Q G S F S Q N V T Y - - P N S Q G Q H M M V
 
AT3G53340.1     Q M P G T E -
pt043410_POPTR_    P M Q S N E -
Sb008970_Sorbi1    Q Y H N G D T
gm007396_Glyma0    P M Q G P E -
 
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