fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G53340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp037985 not found in 177aa AT4G14540.1 1st_not 0.701612903 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G53340.1     MAESQTGGGG--------GGSHESGG-DQSPRSLNVREQDRFLPIANISRIMKRGLPLNG
pp037985_Pp1s25 MAEAGSPGSQDSPHSDDYGGNHGSGERDNS----SVREQDRFLPIANISRIMKKALPANA
                ***: : *.         **.* **  *:*    .******************:.** *.

AT3G53340.1     KIAKDAKETMQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKV
pp037985_Pp1s25 KIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMSTLGFEDYVEPLKV
                *********:**********:*************************:*******::****

AT3G53340.1     YLMRYREMEGDTKGSGKGGESSAKRDGQPSQVSQFSQVPQQGSFSQGPYGNSQGSNMMVQ
pp037985_Pp1s25 YLHKYRETEGAL--TNKAGESSSGKKEGSGMVSPGVQMVQQGGYN--PYMQAQMMN----
                ** :*** **    :.*.****: :.  .. **   *: ***.:.  ** ::*  *    

AT3G53340.1     MPGTE-----
pp037985_Pp1s25 -PGNYQVQHY
                 **.
BoxShade v3.31 C (beta, 970507) Output
AT3G53340.1     M A E S Q T G G G G - - - - - - - - G G S H E S G G - D Q S P R S L N V R E Q D R F L P I A N I S R I M K R G L P L N G
pp037985_Pp1s25    M A E A G S P G S Q D S P H S D D Y G G N H G S G E R D N S - - - - S V R E Q D R F L P I A N I S R I M K K A L P A N A
 
AT3G53340.1     K I A K D A K E T M Q E C V S E F I S F V T S E A S D K C Q R E K R K T I N G D D L L W A M A T L G F E D Y I D P L K V
pp037985_Pp1s25    K I A K D A K E T V Q E C V S E F I S F I T S E A S D K C Q R E K R K T I N G D D L L W A M S T L G F E D Y V E P L K V
 
AT3G53340.1     Y L M R Y R E M E G D T K G S G K G G E S S A K R D G Q P S Q V S Q F S Q V P Q Q G S F S Q G P Y G N S Q G S N M M V Q
pp037985_Pp1s25    Y L H K Y R E T E G A L - - T N K A G E S S S G K K E G S G M V S P G V Q M V Q Q G G Y N - - P Y M Q A Q M M N - - - -
 
AT3G53340.1     M P G T E - - - - -
pp037985_Pp1s25    - P G N Y Q V Q H Y
 
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