fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G53340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt043409 not found in 181aa AT3G53340.1 not_1st 0.794354838 II
Pt035616 not found in 182aa AT3G53340.1 not_1st 0.754032258 II
Pt035615 not found in 182aa AT3G53340.1 not_1st 0.754032258 II
Pt035614 not found in 182aa AT3G53340.1 not_1st 0.754032258 II
Pt035613 not found in 184aa AT3G53340.1 not_1st 0.725806451 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G53340.1     -MAESQTGGGGGGSHESGGDQSPRS-LNVREQDRFLPIANISRIMKRGLPLNGKIAKDAK
pt043409_POPTR_ MAAEAPASPGG-GSHES-GDQSPRSNSNVREQDRFLPIANISRIMKKALPANGKIAKDAK
pt035616_POPTR_ -MADNPTSPAA-GSHESGGEQSPR--SGVREQDRYLPIANISRIMKKALPANGKIAKDAK
pt035614_POPTR_ -MADNPTSPAA-GSHESGGEQSPR--SGVREQDRYLPIANISRIMKKALPANGKIAKDAK
pt035615_POPTR_ -MADNPTSPAA-GSHESGGEQSPR--SGVREQDRYLPIANISRIMKKALPANGKIAKDAK
pt035613_POPTR_ -MADNPTSPAA-GSHESGGEQSPR--SGVREQDRYLPIANISRIMKKALPANGKIAKDAK
                  *:  :. .. ***** *:****   .******:***********:.** *********

AT3G53340.1     ETMQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYRE
pt043409_POPTR_ ETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLSRYRE
pt035616_POPTR_ DTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKVYLARYRE
pt035614_POPTR_ DTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKVYLARYRE
pt035615_POPTR_ DTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKVYLARYRE
pt035613_POPTR_ DTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKVYLARYRE
                :*:**********:*********:****************************:** ****

AT3G53340.1     --MEGDTKGSGKGGESSAKRDG---QPSQVSQ----FSQ---------VPQQGSFSQGPY
pt043409_POPTR_ --MEGDTKGSAKTGDTSAKKDI---HPGPNAQVKWSFMLLSYCHFLFLVNQRTSLSLFYS
pt035616_POPTR_ --LEGDAKGSARGGDGSSKREAVGGLPAQNAQ----FALQGSMNY---ISPQVILSLFLS
pt035614_POPTR_ --LEGDAKGSARGGDGSSKREAVGGLPAQNAQ----FALQGSMNY---ISPQVILSLFLS
pt035615_POPTR_ --LEGDAKGSARGGDGSSKREAVGGLPAQNAQ----FALQGSMNY---ISPQVILSLFLS
pt035613_POPTR_ QLWQGDAKGSARGGDGSSKREAVGGLPAQNAQ----FALQGSMNY---ISPQVILSLFLS
                   :**:***.: *: *:*::     *.  :*    *           :  :  :*    

AT3G53340.1     GNSQGSNMMVQMPGTE-------
pt043409_POPTR_ A-----KLLATLS----------
pt035616_POPTR_ --------LLSLSYTHTHTEKDF
pt035614_POPTR_ --------LLSLSYTHTHTEKDF
pt035615_POPTR_ --------LLSLSYTHTHTEKDF
pt035613_POPTR_ --------LLSLSYTHTHTEKDF
                        :  :.
BoxShade v3.31 C (beta, 970507) Output
AT3G53340.1     - M A E S Q T G G G G G G S H E S G G D Q S P R S - L N V R E Q D R F L P I A N I S R I M K R G L P L N G K I A K D A K
pt043409_POPTR_    M A A E A P A S P G G - G S H E S - G D Q S P R S N S N V R E Q D R F L P I A N I S R I M K K A L P A N G K I A K D A K
pt035616_POPTR_    - M A D N P T S P A A - G S H E S G G E Q S P R - - S G V R E Q D R Y L P I A N I S R I M K K A L P A N G K I A K D A K
pt035614_POPTR_    - M A D N P T S P A A - G S H E S G G E Q S P R - - S G V R E Q D R Y L P I A N I S R I M K K A L P A N G K I A K D A K
pt035615_POPTR_    - M A D N P T S P A A - G S H E S G G E Q S P R - - S G V R E Q D R Y L P I A N I S R I M K K A L P A N G K I A K D A K
pt035613_POPTR_    - M A D N P T S P A A - G S H E S G G E Q S P R - - S G V R E Q D R Y L P I A N I S R I M K K A L P A N G K I A K D A K
 
AT3G53340.1     E T M Q E C V S E F I S F V T S E A S D K C Q R E K R K T I N G D D L L W A M A T L G F E D Y I D P L K V Y L M R Y R E
pt043409_POPTR_    E T V Q E C V S E F I S F I T S E A S D K C Q R E K R K T I N G D D L L W A M A T L G F E D Y I D P L K I Y L S R Y R E
pt035616_POPTR_    D T V Q E C V S E F I S F V T S E A S D K C Q K E K R K T I N G D D L L W A M A T L G F E D Y I D P L K V Y L A R Y R E
pt035614_POPTR_    D T V Q E C V S E F I S F V T S E A S D K C Q K E K R K T I N G D D L L W A M A T L G F E D Y I D P L K V Y L A R Y R E
pt035615_POPTR_    D T V Q E C V S E F I S F V T S E A S D K C Q K E K R K T I N G D D L L W A M A T L G F E D Y I D P L K V Y L A R Y R E
pt035613_POPTR_    D T V Q E C V S E F I S F V T S E A S D K C Q K E K R K T I N G D D L L W A M A T L G F E D Y I D P L K V Y L A R Y R E
 
AT3G53340.1     - - M E G D T K G S G K G G E S S A K R D G - - - Q P S Q V S Q - - - - F S Q - - - - - - - - - V P Q Q G S F S Q G P Y
pt043409_POPTR_    - - M E G D T K G S A K T G D T S A K K D I - - - H P G P N A Q V K W S F M L L S Y C H F L F L V N Q R T S L S L F Y S
pt035616_POPTR_    - - L E G D A K G S A R G G D G S S K R E A V G G L P A Q N A Q - - - - F A L Q G S M N Y - - - I S P Q V I L S L F L S
pt035614_POPTR_    - - L E G D A K G S A R G G D G S S K R E A V G G L P A Q N A Q - - - - F A L Q G S M N Y - - - I S P Q V I L S L F L S
pt035615_POPTR_    - - L E G D A K G S A R G G D G S S K R E A V G G L P A Q N A Q - - - - F A L Q G S M N Y - - - I S P Q V I L S L F L S
pt035613_POPTR_    Q L W Q G D A K G S A R G G D G S S K R E A V G G L P A Q N A Q - - - - F A L Q G S M N Y - - - I S P Q V I L S L F L S
 
AT3G53340.1     G N S Q G S N M M V Q M P G T E - - - - - - -
pt043409_POPTR_    A - - - - - K L L A T L S - - - - - - - - - -
pt035616_POPTR_    - - - - - - - - L L S L S Y T H T H T E K D F
pt035614_POPTR_    - - - - - - - - L L S L S Y T H T H T E K D F
pt035615_POPTR_    - - - - - - - - L L S L S Y T H T H T E K D F
pt035613_POPTR_    - - - - - - - - L L S L S Y T H T H T E K D F
 
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