fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G53340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os021976 not found in 129aa AT4G14540.1 1st_not 0.701612903 II
Os004570 not found in 110aa AT3G53340.1 not_1st 0.685483870 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G53340.1     MAE-SQTGGGGGGSHESGGDQSPR-----------SLNVREQDRFLPIANISRIMKRGLP
Os004570_Os01t0 MAD--------AGHDESG---SPP----------RSGGVREQDRFLPIANISRIMKKAVP
Os021976_Os05t0 MADGPGSPGGGGGSHESG---SPRGGGGGGGGGGGGGGVREQDRFLPIANISRIMKKAIP
                **:        .* .***   **            . .******************:.:*

AT3G53340.1     LNGKIAKDAKETMQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDP
Os004570_Os01t0 ANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTINGEDLLFAMGTLGFEEYVDP
Os021976_Os05t0 ANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEP
                 ***********:**********:*********:********:***:**.*****:*::*

AT3G53340.1     LKVYLMRYREMEGDTKGSGKGGESSAKRDGQPSQVSQFSQVPQQGSFSQGPYGNSQGSNM
Os004570_Os01t0 LKIYLHKYREV-------------------------------------------------
Os021976_Os05t0 LKVYLQKYREVR------------------------------------------------
                **:** :***:                                                 

AT3G53340.1     MVQMPGTE
Os004570_Os01t0 --------
Os021976_Os05t0 --------
BoxShade v3.31 C (beta, 970507) Output
AT3G53340.1     M A E - S Q T G G G G G G S H E S G G D Q S P R - - - - - - - - - - - S L N V R E Q D R F L P I A N I S R I M K R G L P
Os004570_Os01t0    M A D - - - - - - - - A G H D E S G - - - S P P - - - - - - - - - - R S G G V R E Q D R F L P I A N I S R I M K K A V P
Os021976_Os05t0    M A D G P G S P G G G G G S H E S G - - - S P R G G G G G G G G G G G G G G V R E Q D R F L P I A N I S R I M K K A I P
 
AT3G53340.1     L N G K I A K D A K E T M Q E C V S E F I S F V T S E A S D K C Q R E K R K T I N G D D L L W A M A T L G F E D Y I D P
Os004570_Os01t0    A N G K I A K D A K E T L Q E C V S E F I S F V T S E A S D K C Q K E K R K T I N G E D L L F A M G T L G F E E Y V D P
Os021976_Os05t0    A N G K I A K D A K E T V Q E C V S E F I S F I T S E A S D K C Q R E K R K T I N G D D L L W A M A T L G F E D Y I E P
 
AT3G53340.1     L K V Y L M R Y R E M E G D T K G S G K G G E S S A K R D G Q P S Q V S Q F S Q V P Q Q G S F S Q G P Y G N S Q G S N M
Os004570_Os01t0    L K I Y L H K Y R E V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os021976_Os05t0    L K V Y L Q K Y R E V R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G53340.1     M V Q M P G T E
Os004570_Os01t0    - - - - - - - -
Os021976_Os05t0    - - - - - - - -
 
0