fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G53340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb008970 not found in 167aa AT3G53340.1 1st_1st 0.717741935 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G53340.1     MAE---SQTGGGGGGSHESGGDQSPRSLNVREQDRFLPIANISRIMKRGLPLNGKIAKDA
Sb008970_Sorbi1 MADDGGSHEGGGGGGG--GGG--------YREQDRFLPIANISRIMKKAVPANGKIAKDA
                **:   *: ******.  .**         *****************:.:* ********

AT3G53340.1     KETMQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYR
Sb008970_Sorbi1 KETLQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYVEPLKIYLQKYR
                ***:********************:*********************:*::***:** :**

AT3G53340.1     EMEGDTKGSGKGGESSAKRDGQPSQ---VSQFSQVPQQGSFSQG-PYGNSQGSNMMVQMP
Sb008970_Sorbi1 EMEGDSKLSTKAGEGSIKKDAISSHGGTSSSSNQLVQHGVYNQGMGYMQPQYHN------
                *****:* * *.**.* *:*. .*:    *. .*: *:* :.**  * :.*  *      

AT3G53340.1     GTE
Sb008970_Sorbi1 GDT
                *
BoxShade v3.31 C (beta, 970507) Output
AT3G53340.1     M A E - - - S Q T G G G G G G S H E S G G D Q S P R S L N V R E Q D R F L P I A N I S R I M K R G L P L N G K I A K D A
Sb008970_Sorbi1    M A D D G G S H E G G G G G G G - - G G G - - - - - - - - Y R E Q D R F L P I A N I S R I M K K A V P A N G K I A K D A
 
AT3G53340.1     K E T M Q E C V S E F I S F V T S E A S D K C Q R E K R K T I N G D D L L W A M A T L G F E D Y I D P L K V Y L M R Y R
Sb008970_Sorbi1    K E T L Q E C V S E F I S F V T S E A S D K C Q K E K R K T I N G D D L L W A M A T L G F E E Y V E P L K I Y L Q K Y R
 
AT3G53340.1     E M E G D T K G S G K G G E S S A K R D G Q P S Q - - - V S Q F S Q V P Q Q G S F S Q G - P Y G N S Q G S N M M V Q M P
Sb008970_Sorbi1    E M E G D S K L S T K A G E G S I K K D A I S S H G G T S S S S N Q L V Q H G V Y N Q G M G Y M Q P Q Y H N - - - - - -
 
AT3G53340.1     G T E
Sb008970_Sorbi1    G D T
 
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