Input
| Putative repression domain
|
|
AT3G53820.1 |
SADVIDLELRLGLDPY at 123/142 in AT3G53820.1 |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt044643 |
ATSQAGLDLELRLGSE in 137/161 |
AT3G53820.1 |
1st_1st |
0.325259515 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT3G53820.1 -----MNRKYLDRRSYS----WSGSQARPYICEFCERGFSNAQALGGHMNIHRKDRAKLR
pt044643_POPTR_ MDISLTTTGKSDQKACSSDDLQGSSHVRSYTCSFCKRGFTNAQALGGHMNIHRRDRAKLK
. *::: * ..*:.*.* *.**:***:*************:*****:
AT3G53820.1 QA--------NLKEEDSEDAI-------------CTTSRNRFGQELIELPFFVDTVGPRR
pt044643_POPTR_ QALDENFLSLNITKSTEETSSAPETPCAPSIEDDCATPRNKASEEFQQLPFIVDA----K
** *:.:. .* : *:*.**: .:*: :***:**: :
AT3G53820.1 KGEDDKSEKGLGDEEKKNMRILQKALSQSADVIDLELRLGLDPYKKTTSTST----
pt044643_POPTR_ VGTD-------GSEENK-MEFNQ-ATSQAG--LDLELRLGSEPHESSTRSSTRKFS
* * *.**:* *.: * * **:. :******* :*::.:* :**
BoxShade v3.31 C (beta, 970507) Output
AT3G53820.1 |
- |
- |
- |
- |
- |
M |
N |
R |
K |
Y |
L |
D |
R |
R |
S |
Y |
S |
- |
- |
- |
- |
W |
S |
G |
S |
Q |
A |
R |
P |
Y |
I |
C |
E |
F |
C |
E |
R |
G |
F |
S |
N |
A |
Q |
A |
L |
G |
G |
H |
M |
N |
I |
H |
R |
K |
D |
R |
A |
K |
L |
R |
pt044643_POPTR_ |
M |
D |
I |
S |
L |
T |
T |
T |
G |
K |
S |
D |
Q |
K |
A |
C |
S |
S |
D |
D |
L |
Q |
G |
S |
S |
H |
V |
R |
S |
Y |
T |
C |
S |
F |
C |
K |
R |
G |
F |
T |
N |
A |
Q |
A |
L |
G |
G |
H |
M |
N |
I |
H |
R |
R |
D |
R |
A |
K |
L |
K |
|
AT3G53820.1 |
Q |
A |
- |
- |
- |
- |
- |
- |
- |
- |
N |
L |
K |
E |
E |
D |
S |
E |
D |
A |
I |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
C |
T |
T |
S |
R |
N |
R |
F |
G |
Q |
E |
L |
I |
E |
L |
P |
F |
F |
V |
D |
T |
V |
G |
P |
R |
R |
pt044643_POPTR_ |
Q |
A |
L |
D |
E |
N |
F |
L |
S |
L |
N |
I |
T |
K |
S |
T |
E |
E |
T |
S |
S |
A |
P |
E |
T |
P |
C |
A |
P |
S |
I |
E |
D |
D |
C |
A |
T |
P |
R |
N |
K |
A |
S |
E |
E |
F |
Q |
Q |
L |
P |
F |
I |
V |
D |
A |
- |
- |
- |
- |
K |
|
AT3G53820.1 |
K |
G |
E |
D |
D |
K |
S |
E |
K |
G |
L |
G |
D |
E |
E |
K |
K |
N |
M |
R |
I |
L |
Q |
K |
A |
L |
S |
Q |
S |
A |
D |
V |
I |
D |
L |
E |
L |
R |
L |
G |
L |
D |
P |
Y |
K |
K |
T |
T |
S |
T |
S |
T |
- |
- |
- |
- |
pt044643_POPTR_ |
V |
G |
T |
D |
- |
- |
- |
- |
- |
- |
- |
G |
S |
E |
E |
N |
K |
- |
M |
E |
F |
N |
Q |
- |
A |
T |
S |
Q |
A |
G |
- |
- |
L |
D |
L |
E |
L |
R |
L |
G |
S |
E |
P |
H |
E |
S |
S |
T |
R |
S |
S |
T |
R |
K |
F |
S |
|
|