fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G54220.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt044245 not found in 413aa AT5G41920.1 not_not 0.423822714 III
Pt007132 not found in 444aa AT5G41920.1 not_not 0.419205909 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G54220.1     MAESGDFNGGQPPPHSPLRTTSSGSSSSNNRGPPPPPPPPLVMVRKRLASEMSSNPDYNN
pt007132_POPTR_ MLQS-------LIPQSPINSTNPNNSSSS------------PMKSKRAAADLTVG-----
pt044245_POPTR_ ------------------------------------------MKSKRAAADLTAG-----
                                                          *  ** *:::: .     

AT3G54220.1     SSRPPRRVSHLLDSNYNTVTPQQPPSLTAAATVSSQPNPPLSVCGFSGLPVFPSDRGGRN
pt007132_POPTR_ ------------------------------------------------------------
pt044245_POPTR_ ------------------------------------------------------------
                                                                            

AT3G54220.1     VMMSVQPMDQDSSSSSASPTVWVDAIIRDLIHSSTSVSIPQLIQNVRDIIFPCNPNLGAL
pt007132_POPTR_ ----------ESSGD---------------------------------------------
pt044245_POPTR_ ----------DSSGE---------------------------------------------
                          :**..                                             

AT3G54220.1     LEYRLRSLMLLDPSSSSDPSPQTFEPLYQISNNPSPPQQQQQHQQQQQQHKPPPPPIQQQ
pt007132_POPTR_ -----------DPSS------------------------------------------KRV
pt044245_POPTR_ -----------DPSS------------------------------------------KRV
                           ****                                          :: 

AT3G54220.1     ERENSSTDAPPQPETVTATVPAVQTNTAEALRERKEEIKRQKQDEEGLHLLTLLLQCAEA
pt007132_POPTR_ SYENPTTEIVSSTNLVEG---GGGDDGGES---------------SGLRLLGLLLQCAEC
pt044245_POPTR_ SYEKPTTEI----DCV-------GDDGGEA---------------SGLRLLGLLLQCAEC
                . *:.:*:     : *         : .*:               .**:** *******.

AT3G54220.1     VSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAMSARLLNSCLGIYAALPSRWMPQ
pt007132_POPTR_ VAMDNLNGATDLLPEIAELSTPFGSSPERVGAYFAHALQVRVVSSILGTYSPLVSKSVTR
pt044245_POPTR_ VAMDNLNDATDLLPEIAELSSPFGSSPERVGAYFAHALQARVVGSCLGTYSPLVSKSVTL
                *: ***: *..** **::**:*:*:*.:**.***:.*:..*::.* ** *:.* *: :. 

AT3G54220.1     THSLKMVSAFQVFNGISPLVKFSHFTANQAIQEAFEKEDSVHIIDLDIMQGLQWPGLFHI
pt007132_POPTR_ TQSQKLFNALQSYNSISPLVKFSHFTANQAIFQALDGEDRVHVIDLDIMQGLQWPGLFHI
pt044245_POPTR_ TQSQRLFNALQSYNSISPLVKFSHFTANQAIFQALDGEDRVHVIDLDIMQGLQWPGLFHI
                *:* ::..*:* :*.**************** :*:: ** **:*****************

AT3G54220.1     LASRPGGPPHVRLTGLGTSMEALQATGKRLSDFADKLGLPFEFCPLAEKVGNL-DTERLN
pt007132_POPTR_ LASRPRKIRSMRITGFGSSSELLESTGRRLADFASSLGLPFEFHPLEGKIGNVTGLSQLG
pt044245_POPTR_ LASRPKKIRSMRITGFGSSSELLESTGRRLADFASSLGLPFEFHPLEGKIGNVTDLSQLG
                *****     :*:**:*:* * *::**:**:***..******* **  *:**: . .:*.

AT3G54220.1     VRKREAVAVHWLQHSLYDVTGSDAHTLWLLQRLAPKVVTVVEQDLSHAGSFLGRFVEAIH
pt007132_POPTR_ VRPREAIVVHWMHHCLYDVTGSDLETLKLLALLRPKLITTVEQDLSHGGSFLGRFVEALH
pt044245_POPTR_ VRPREAIVVHWMHHCLYDVTGSDLGTLKLLTLLRPKLITTVEQDLSHGGSFLGRFVEALH
                ** ***:.***::*.********  ** **  * **::*.*******.**********:*

AT3G54220.1     YYSALFDSLGASYGEESEERHVVEQQLLSKEIRNVLAVGGPSRSGEVKFESWREKMQQCG
pt007132_POPTR_ YYSALFDALGDGLGVDSVERHMVEQQLFGCEIRNIVAVGGPKRTGEVKVERWGDELRRSG
pt044245_POPTR_ YYSALFDALGDGLGVDSVERHMVEQQLFGCEIRNIVAVGGPKRTGEVKVERWGDELRRVG
                *******:** . * :* ***:*****:. ****::*****.*:****.* * ::::: *

AT3G54220.1     FKGISLAGNAATQATLLLGMFPSDGYTLVDDNGTLKLGWKDLSLLTASAWTPRS
pt007132_POPTR_ FRPVSLQGNPAAQAGLLLGMFPWRGYTLVEENGCLKLGWKDLSLLTASAWQPSD
pt044245_POPTR_ FEPVSLGGSPAAQASLLLGMFPWKGYTLVEENGSLKLGWKDLSLLTASAWQPSD
                *. :** *..*:** *******  *****::** **************** * .
BoxShade v3.31 C (beta, 970507) Output
AT3G54220.1     M A E S G D F N G G Q P P P H S P L R T T S S G S S S S N N R G P P P P P P P P L V M V R K R L A S E M S S N P D Y N N
pt007132_POPTR_    M L Q S - - - - - - - L I P Q S P I N S T N P N N S S S S - - - - - - - - - - - - P M K S K R A A A D L T V G - - - - -
pt044245_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M K S K R A A A D L T A G - - - - -
 
AT3G54220.1     S S R P P R R V S H L L D S N Y N T V T P Q Q P P S L T A A A T V S S Q P N P P L S V C G F S G L P V F P S D R G G R N
pt007132_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt044245_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G54220.1     V M M S V Q P M D Q D S S S S S A S P T V W V D A I I R D L I H S S T S V S I P Q L I Q N V R D I I F P C N P N L G A L
pt007132_POPTR_    - - - - - - - - - - E S S G D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt044245_POPTR_    - - - - - - - - - - D S S G E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G54220.1     L E Y R L R S L M L L D P S S S S D P S P Q T F E P L Y Q I S N N P S P P Q Q Q Q Q H Q Q Q Q Q Q H K P P P P P I Q Q Q
pt007132_POPTR_    - - - - - - - - - - - D P S S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K R V
pt044245_POPTR_    - - - - - - - - - - - D P S S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K R V
 
AT3G54220.1     E R E N S S T D A P P Q P E T V T A T V P A V Q T N T A E A L R E R K E E I K R Q K Q D E E G L H L L T L L L Q C A E A
pt007132_POPTR_    S Y E N P T T E I V S S T N L V E G - - - G G G D D G G E S - - - - - - - - - - - - - - - S G L R L L G L L L Q C A E C
pt044245_POPTR_    S Y E K P T T E I - - - - D C V - - - - - - - G D D G G E A - - - - - - - - - - - - - - - S G L R L L G L L L Q C A E C
 
AT3G54220.1     V S A D N L E E A N K L L L E I S Q L S T P Y G T S A Q R V A A Y F S E A M S A R L L N S C L G I Y A A L P S R W M P Q
pt007132_POPTR_    V A M D N L N G A T D L L P E I A E L S T P F G S S P E R V G A Y F A H A L Q V R V V S S I L G T Y S P L V S K S V T R
pt044245_POPTR_    V A M D N L N D A T D L L P E I A E L S S P F G S S P E R V G A Y F A H A L Q A R V V G S C L G T Y S P L V S K S V T L
 
AT3G54220.1     T H S L K M V S A F Q V F N G I S P L V K F S H F T A N Q A I Q E A F E K E D S V H I I D L D I M Q G L Q W P G L F H I
pt007132_POPTR_    T Q S Q K L F N A L Q S Y N S I S P L V K F S H F T A N Q A I F Q A L D G E D R V H V I D L D I M Q G L Q W P G L F H I
pt044245_POPTR_    T Q S Q R L F N A L Q S Y N S I S P L V K F S H F T A N Q A I F Q A L D G E D R V H V I D L D I M Q G L Q W P G L F H I
 
AT3G54220.1     L A S R P G G P P H V R L T G L G T S M E A L Q A T G K R L S D F A D K L G L P F E F C P L A E K V G N L - D T E R L N
pt007132_POPTR_    L A S R P R K I R S M R I T G F G S S S E L L E S T G R R L A D F A S S L G L P F E F H P L E G K I G N V T G L S Q L G
pt044245_POPTR_    L A S R P K K I R S M R I T G F G S S S E L L E S T G R R L A D F A S S L G L P F E F H P L E G K I G N V T D L S Q L G
 
AT3G54220.1     V R K R E A V A V H W L Q H S L Y D V T G S D A H T L W L L Q R L A P K V V T V V E Q D L S H A G S F L G R F V E A I H
pt007132_POPTR_    V R P R E A I V V H W M H H C L Y D V T G S D L E T L K L L A L L R P K L I T T V E Q D L S H G G S F L G R F V E A L H
pt044245_POPTR_    V R P R E A I V V H W M H H C L Y D V T G S D L G T L K L L T L L R P K L I T T V E Q D L S H G G S F L G R F V E A L H
 
AT3G54220.1     Y Y S A L F D S L G A S Y G E E S E E R H V V E Q Q L L S K E I R N V L A V G G P S R S G E V K F E S W R E K M Q Q C G
pt007132_POPTR_    Y Y S A L F D A L G D G L G V D S V E R H M V E Q Q L F G C E I R N I V A V G G P K R T G E V K V E R W G D E L R R S G
pt044245_POPTR_    Y Y S A L F D A L G D G L G V D S V E R H M V E Q Q L F G C E I R N I V A V G G P K R T G E V K V E R W G D E L R R V G
 
AT3G54220.1     F K G I S L A G N A A T Q A T L L L G M F P S D G Y T L V D D N G T L K L G W K D L S L L T A S A W T P R S
pt007132_POPTR_    F R P V S L Q G N P A A Q A G L L L G M F P W R G Y T L V E E N G C L K L G W K D L S L L T A S A W Q P S D
pt044245_POPTR_    F E P V S L G G S P A A Q A S L L L G M F P W K G Y T L V E E N G S L K L G W K D L S L L T A S A W Q P S D
 
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