fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G54320.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt042423 not found in 360aa AT3G54320.3 not_not 0.470483005 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G54320.2     MDWEIRGSSLG--------------------------QKLLEFDSEQ------------E
pt042423_POPTR_ MK---RSSSCSSSSSSSPYCVASESIQKPKVKRIRKNQKSNQGKSHKNAAAAANSPNSGK
                *.   *.** .                          **  : .*.:            :

AT3G54320.2     RQTRFR-----------------------------------AYDSEEAAAHTYDLAALKY
pt042423_POPTR_ RSSIYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGKQVYLGAYDNEEAAAHTYDLAALKY
                *.: :*                                   ***.***************

AT3G54320.2     WGPDTILNFPAETYTKELEEMQRVTKEEYLASLRRQSSGFSRGVSKYRGVARHHHNGRWE
pt042423_POPTR_ WGAETTLNFPIETYTTEIEEMQRVTREEYLASLRRKSSGFSRGVSKYRGVARHHHNGRWE
                **.:* **** ****.*:*******:*********:************************

AT3G54320.2     ARIGRVFGNKYLYLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISNYIDRLKKKGVFPF
pt042423_POPTR_ ARIGRVQGNKYLYLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDAGNYIERMREKGI---
                ****** ************************************* .***:*:::**:   

AT3G54320.2     PVNQANHQEGILVEAKQEVETREAKEEPREEVKQQYVEEP-PQEEEEKEEEKAEQQEAEI
pt042423_POPTR_ PIDQ------ILQEQQQQQQLGNNSIDPGIEVEAG-VEQPSPQQQEEQEQKVAPSLQV--
                *::*      ** * :*: :  : . :*  **:   **:* **::**:*:: * . :.  

AT3G54320.2     VGYSEEAAVVNCCIDSSTIMEMDRCGDNNELAWNFCMMDTGFSPFLTDQNLANENPIEYP
pt042423_POPTR_ -----QCTQLDSSLDGASPMVITDTIEEHEQAWSFC-MDSGWN--LTMLDLPFENSCELP
                     :.: ::..:*.:: * :    :::* **.** **:*:.  **  :*. **. * *

AT3G54320.2     ELFNELAFEDNIDFMFDDGKHECLNLENLDCCVVGRESPPSSSSPLSCLSTDSASSTTTT
pt042423_POPTR_ DLFNHTGFEDNIDLMF-------------DACCYGN------------------------
                :***. .******:**             *.*  *.                        

AT3G54320.2     TTSVSCNYLV
pt042423_POPTR_ ----------
BoxShade v3.31 C (beta, 970507) Output
AT3G54320.2     M D W E I R G S S L G - - - - - - - - - - - - - - - - - - - - - - - - - - Q K L L E F D S E Q - - - - - - - - - - - - E
pt042423_POPTR_    M K - - - R S S S C S S S S S S S P Y C V A S E S I Q K P K V K R I R K N Q K S N Q G K S H K N A A A A A N S P N S G K
 
AT3G54320.2     R Q T R F R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A Y D S E E A A A H T Y D L A A L K Y
pt042423_POPTR_    R S S I Y R G V T R H R W T G R F E A H L W D K S S W N S I Q N K K G K Q V Y L G A Y D N E E A A A H T Y D L A A L K Y
 
AT3G54320.2     W G P D T I L N F P A E T Y T K E L E E M Q R V T K E E Y L A S L R R Q S S G F S R G V S K Y R G V A R H H H N G R W E
pt042423_POPTR_    W G A E T T L N F P I E T Y T T E I E E M Q R V T R E E Y L A S L R R K S S G F S R G V S K Y R G V A R H H H N G R W E
 
AT3G54320.2     A R I G R V F G N K Y L Y L G T Y N T Q E E A A A A Y D M A A I E Y R G A N A V T N F D I S N Y I D R L K K K G V F P F
pt042423_POPTR_    A R I G R V Q G N K Y L Y L G T Y N T Q E E A A A A Y D M A A I E Y R G A N A V T N F D A G N Y I E R M R E K G I - - -
 
AT3G54320.2     P V N Q A N H Q E G I L V E A K Q E V E T R E A K E E P R E E V K Q Q Y V E E P - P Q E E E E K E E E K A E Q Q E A E I
pt042423_POPTR_    P I D Q - - - - - - I L Q E Q Q Q Q Q Q L G N N S I D P G I E V E A G - V E Q P S P Q Q Q E E Q E Q K V A P S L Q V - -
 
AT3G54320.2     V G Y S E E A A V V N C C I D S S T I M E M D R C G D N N E L A W N F C M M D T G F S P F L T D Q N L A N E N P I E Y P
pt042423_POPTR_    - - - - - Q C T Q L D S S L D G A S P M V I T D T I E E H E Q A W S F C - M D S G W N - - L T M L D L P F E N S C E L P
 
AT3G54320.2     E L F N E L A F E D N I D F M F D D G K H E C L N L E N L D C C V V G R E S P P S S S S P L S C L S T D S A S S T T T T
pt042423_POPTR_    D L F N H T G F E D N I D L M F - - - - - - - - - - - - - D A C C Y G N - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G54320.2     T T S V S C N Y L V
pt042423_POPTR_    - - - - - - - - - -
 
0