fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G54320.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt033686 not found in 402aa AT3G54320.3 1st_not 0.491949910 II
Pt042423 not found in 360aa AT3G54320.3 not_not 0.470483005 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G54320.2     MDWEIRGSSL---------------------------GQKLLEFDSEQ------------
pt033686_POPTR_ MK---RSSSCSSSSSSSSSSCVASESIHKPKAKRIRKNQKSNQGKSQNAAAAAANNSHNS
pt042423_POPTR_ MK---RSSSC-SSSSSSSPYCVASESIQKPKVKRIRKNQKSNQGKSHKNAAAAA-NSPNS
                *.   *.**                            .**  : .*.:            

AT3G54320.2     -ERQTRFR-----------------------------------AYDSEEAAAHTYDLAAL
pt033686_POPTR_ GKRSSIYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGKQ---GAYDNEEAAAHTYDLAAL
pt042423_POPTR_ GKRSSIYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGKQVYLGAYDNEEAAAHTYDLAAL
                 :*.: :*                                   ***.*************

AT3G54320.2     KYWGPDTILNFPAETYTKELEEMQRVTKEEYLASLRRQSSGFSRGVSKYRGVARHHHNGR
pt033686_POPTR_ KYWGSETTLNFPIETYTKEIEEMQKVTKEEYLASLRRQSSGFSRGVSKYRGVARHHHNGR
pt042423_POPTR_ KYWGAETTLNFPIETYTTEIEEMQRVTREEYLASLRRKSSGFSRGVSKYRGVARHHHNGR
                ****.:* **** ****.*:****:**:*********:**********************

AT3G54320.2     WEARIGRVFGNKYLYLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISNYIDRLKKKGVF
pt033686_POPTR_ WEARIGRVYGNKYLYLGTYNTQEEAAAAYDMAAIQYRGANAVTNFDVSNYIERLRKKGI-
pt042423_POPTR_ WEARIGRVQGNKYLYLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDAGNYIERMREKGI-
                ******** *************************:*********** .***:*:::**: 

AT3G54320.2     PFPVNQANHQEGILVEAKQEVETREAKEEPREEVKQQYVEEP---PQEEEEKEEEKAEQQ
pt033686_POPTR_ --PIDR------ILQE----QQLLNNSVDSSVEVE---VEQPTPPPQQQQEEQEQKIVSS
pt042423_POPTR_ --PIDQ------ILQEQQQQQQLGNNSIDPGIEVEA-GVEQPSP---QQQEEQEQK-VAP
                  *:::      ** *     :  : . :.  **:   **:*     :::*::*:*    

AT3G54320.2     EAEIVGYSEEAAVVNCCIDSSTIMEMDRCGDNNELAWNFCMMDTGFSPFLTDQNLANENP
pt033686_POPTR_ SSQL-----QCSQLNSSLDGTPPMVIMDTIEEHELAWSFC-MDSGLS--LTMPDLPLENS
pt042423_POPTR_ SLQV-----QCTQLDSSLDGASPMVITDTIEEHEQAWSFC-MDSGWN--LTMLDLPFENS
                . ::     :.: ::..:*.:. * :    :::* **.** **:* .  **  :*. **.

AT3G54320.2     IEYPELFNELAFEDNIDFMFDDGKHECLNLENLDCCVVGRESPPSSSS---------PLS
pt033686_POPTR_ CELPDLFDHTGFEDNIDLIF-------------DACCYGKEANPAGYTLEDNSTGGVEED
pt042423_POPTR_ CELPDLFNHTGFEDNIDLMF-------------DACCYGN--------------------
                 * *:**:. .******::*             *.*  *.                    

AT3G54320.2     CLSTDSASS--TTTTTTSVSCNYLV
pt033686_POPTR_ RLSSDSVSNSPTSSTTTSVSCNYSV
pt042423_POPTR_ -------------------------
BoxShade v3.31 C (beta, 970507) Output
AT3G54320.2     M D W E I R G S S L - - - - - - - - - - - - - - - - - - - - - - - - - - - G Q K L L E F D S E Q - - - - - - - - - - - -
pt033686_POPTR_    M K - - - R S S S C S S S S S S S S S S C V A S E S I H K P K A K R I R K N Q K S N Q G K S Q N A A A A A A N N S H N S
pt042423_POPTR_    M K - - - R S S S C - S S S S S S S P Y C V A S E S I Q K P K V K R I R K N Q K S N Q G K S H K N A A A A A - N S P N S
 
AT3G54320.2     - E R Q T R F R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A Y D S E E A A A H T Y D L A A L
pt033686_POPTR_    G K R S S I Y R G V T R H R W T G R F E A H L W D K S S W N S I Q N K K G K Q - - - G A Y D N E E A A A H T Y D L A A L
pt042423_POPTR_    G K R S S I Y R G V T R H R W T G R F E A H L W D K S S W N S I Q N K K G K Q V Y L G A Y D N E E A A A H T Y D L A A L
 
AT3G54320.2     K Y W G P D T I L N F P A E T Y T K E L E E M Q R V T K E E Y L A S L R R Q S S G F S R G V S K Y R G V A R H H H N G R
pt033686_POPTR_    K Y W G S E T T L N F P I E T Y T K E I E E M Q K V T K E E Y L A S L R R Q S S G F S R G V S K Y R G V A R H H H N G R
pt042423_POPTR_    K Y W G A E T T L N F P I E T Y T T E I E E M Q R V T R E E Y L A S L R R K S S G F S R G V S K Y R G V A R H H H N G R
 
AT3G54320.2     W E A R I G R V F G N K Y L Y L G T Y N T Q E E A A A A Y D M A A I E Y R G A N A V T N F D I S N Y I D R L K K K G V F
pt033686_POPTR_    W E A R I G R V Y G N K Y L Y L G T Y N T Q E E A A A A Y D M A A I Q Y R G A N A V T N F D V S N Y I E R L R K K G I -
pt042423_POPTR_    W E A R I G R V Q G N K Y L Y L G T Y N T Q E E A A A A Y D M A A I E Y R G A N A V T N F D A G N Y I E R M R E K G I -
 
AT3G54320.2     P F P V N Q A N H Q E G I L V E A K Q E V E T R E A K E E P R E E V K Q Q Y V E E P - - - P Q E E E E K E E E K A E Q Q
pt033686_POPTR_    - - P I D R - - - - - - I L Q E - - - - Q Q L L N N S V D S S V E V E - - - V E Q P T P P P Q Q Q Q E E Q E Q K I V S S
pt042423_POPTR_    - - P I D Q - - - - - - I L Q E Q Q Q Q Q Q L G N N S I D P G I E V E A - G V E Q P S P - - - Q Q Q E E Q E Q K - V A P
 
AT3G54320.2     E A E I V G Y S E E A A V V N C C I D S S T I M E M D R C G D N N E L A W N F C M M D T G F S P F L T D Q N L A N E N P
pt033686_POPTR_    S S Q L - - - - - Q C S Q L N S S L D G T P P M V I M D T I E E H E L A W S F C - M D S G L S - - L T M P D L P L E N S
pt042423_POPTR_    S L Q V - - - - - Q C T Q L D S S L D G A S P M V I T D T I E E H E Q A W S F C - M D S G W N - - L T M L D L P F E N S
 
AT3G54320.2     I E Y P E L F N E L A F E D N I D F M F D D G K H E C L N L E N L D C C V V G R E S P P S S S S - - - - - - - - - P L S
pt033686_POPTR_    C E L P D L F D H T G F E D N I D L I F - - - - - - - - - - - - - D A C C Y G K E A N P A G Y T L E D N S T G G V E E D
pt042423_POPTR_    C E L P D L F N H T G F E D N I D L M F - - - - - - - - - - - - - D A C C Y G N - - - - - - - - - - - - - - - - - - - -
 
AT3G54320.2     C L S T D S A S S - - T T T T T T S V S C N Y L V
pt033686_POPTR_    R L S S D S V S N S P T S S T T T S V S C N Y S V
pt042423_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - -
 
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