fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G54320.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm042901 not found in 409aa AT3G54320.3 1st_not 0.413237924 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G54320.2     ------MDWEIRGSSLG--------------------QKLLE------------------
gm042901_Glyma1 MKRSPASSCSSSTSSVGFEAPIEKRRPKHPRRNNLKSQKCKQNQTTTGGRRSSIYRGVTR
                       . .   **:*                    **  :                  

AT3G54320.2     ----------------FDSEQERQTRFRAYDSEEAAAHTYDLAALKYWGPDTILNFPAET
gm042901_Glyma1 HRWTGRFEAHLWDKSSWNNIQSKKGRQGAYDTEESAARTYDLAALKYWGKDATLNFPIET
                                ::. *.:: *  ***:**:**:*********** *: **** **

AT3G54320.2     YTKELEEMQRVTKEEYLASLRRQSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLY
gm042901_Glyma1 YTKELEEMDKVSREEYLASLRRQSSGFSRGLSKYRGVARHHHNGRWEARIGRVCGNKYLY
                ********::*::*****************:********************** ******

AT3G54320.2     LGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISNYIDRLKKKGVFPFPVNQANHQEGILV
gm042901_Glyma1 LGTYKTQEEAAVAYDMAAIEYRGVNAVTNFDISNYMDKIKKKN------DQTQQQQ---T
                ****:******.***********.***********:*::***.      :*:::*:   .

AT3G54320.2     EAKQEVETREAKEEPREEVKQQ---YVEEPPQEEEEKEEEKAEQQEAEIVGYSEEAAVVN
gm042901_Glyma1 EAQTETVPNSSDSE-EVEVEQQTTTITTPPPSENLHMPPQQHQVQYTPHVSPREEES---
                **: *. ...:..* . **:**    .  **.*: .   :: : * :  *.  ** :   

AT3G54320.2     CCIDSSTIMEMDRCGDNNELAWNFCMMDTGFSPFLTDQNLA----NENPIEYPELFNELA
gm042901_Glyma1 ----SSLITIMDHVLE-QDLPWSF--MYTGLSQF-QDPNLAFCKGDDDLV---GMFDSAG
                    ** *  **:  : ::*.*.*  * **:* *  * ***    ::: :    :*:. .

AT3G54320.2     FEDNIDFMFDD--GKHECLNLENLDCCVVGRESPPSSSSPLSCLSTD------SASSTTT
gm042901_Glyma1 FEEDIDFLFSTQPGDETESDVNNMSAVLDSVECGDTNGAGGSMMHVDNKQKIVSFASSPS
                **::***:*.   *..   :::*:.. : . *.  :..:  * : .*      * :*:.:

AT3G54320.2     TTTSVSCNYLV--
gm042901_Glyma1 STTTVSCDYALDL
                :**:***:* :
BoxShade v3.31 C (beta, 970507) Output
AT3G54320.2     - - - - - - M D W E I R G S S L G - - - - - - - - - - - - - - - - - - - - Q K L L E - - - - - - - - - - - - - - - - - -
gm042901_Glyma1    M K R S P A S S C S S S T S S V G F E A P I E K R R P K H P R R N N L K S Q K C K Q N Q T T T G G R R S S I Y R G V T R
 
AT3G54320.2     - - - - - - - - - - - - - - - - F D S E Q E R Q T R F R A Y D S E E A A A H T Y D L A A L K Y W G P D T I L N F P A E T
gm042901_Glyma1    H R W T G R F E A H L W D K S S W N N I Q S K K G R Q G A Y D T E E S A A R T Y D L A A L K Y W G K D A T L N F P I E T
 
AT3G54320.2     Y T K E L E E M Q R V T K E E Y L A S L R R Q S S G F S R G V S K Y R G V A R H H H N G R W E A R I G R V F G N K Y L Y
gm042901_Glyma1    Y T K E L E E M D K V S R E E Y L A S L R R Q S S G F S R G L S K Y R G V A R H H H N G R W E A R I G R V C G N K Y L Y
 
AT3G54320.2     L G T Y N T Q E E A A A A Y D M A A I E Y R G A N A V T N F D I S N Y I D R L K K K G V F P F P V N Q A N H Q E G I L V
gm042901_Glyma1    L G T Y K T Q E E A A V A Y D M A A I E Y R G V N A V T N F D I S N Y M D K I K K K N - - - - - - D Q T Q Q Q Q - - - T
 
AT3G54320.2     E A K Q E V E T R E A K E E P R E E V K Q Q - - - Y V E E P P Q E E E E K E E E K A E Q Q E A E I V G Y S E E A A V V N
gm042901_Glyma1    E A Q T E T V P N S S D S E - E V E V E Q Q T T T I T T P P P S E N L H M P P Q Q H Q V Q Y T P H V S P R E E E S - - -
 
AT3G54320.2     C C I D S S T I M E M D R C G D N N E L A W N F C M M D T G F S P F L T D Q N L A - - - - N E N P I E Y P E L F N E L A
gm042901_Glyma1    - - - - S S L I T I M D H V L E - Q D L P W S F - - M Y T G L S Q F - Q D P N L A F C K G D D D L V - - - G M F D S A G
 
AT3G54320.2     F E D N I D F M F D D - - G K H E C L N L E N L D C C V V G R E S P P S S S S P L S C L S T D - - - - - - S A S S T T T
gm042901_Glyma1    F E E D I D F L F S T Q P G D E T E S D V N N M S A V L D S V E C G D T N G A G G S M M H V D N K Q K I V S F A S S P S
 
AT3G54320.2     T T T S V S C N Y L V - -
gm042901_Glyma1    S T T T V S C D Y A L D L
 
1