fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G54340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm013895 not found in 227aa AT3G54340.1 not_1st 0.558635394 II
Gm030127 not found in 231aa AT3G54340.1 not_1st 0.439232409 II
Gm030126 not found in 232aa AT3G54340.1 not_1st 0.428571428 II
Gm001714 not found in 243aa AT3G54340.1 not_1st 0.417910447 II
Gm001715 not found in 204aa AT3G54340.1 not_1st 0.417910447 II
Pt001022 not found in 209aa AT3G54340.1 not_1st 0.426439232 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G54340.1     MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISP
gm013895_Glyma0 MARGKIQIKRIENTTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP
gm030126_Glyma1 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYISP
gm001714_Glyma0 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYISP
pt001022_POPTR_ MGRGKIEIKKIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTNKFHEYISP
gm001715_Glyma0 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYISP
gm030127_Glyma1 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYISP
                *.****:** *** *************:****:**:*****:**:****...*:******

AT3G54340.1     NTTTKEIVDLYQTISD-VDVWATQYERMQETKRKLLETNRNLRTQIKQRLGE--CLDELD
gm013895_Glyma0 STSTKQFFDQYQMTLG-VDLWNSHYENMQENLKKLKDVNRNLRKEIRQRMGD--CLNDLG
gm030126_Glyma1 GLTTKRIIDQYQKTLGDIDLWRSHYEKMLENLKKLIDINNKLRRQI--RIGEGLDMDDMS
gm001714_Glyma0 GLTTKKIIDQYQKTLGDIDLWHSHYEKMLENLKKLKDINNKLRRQIRHRIGEGLDMDDMS
pt001022_POPTR_ STTTKKIYDQYQKALG-IDLWSAQYE---------ISINHKLKKEIRQRIGE--DLNELS
gm001715_Glyma0 GLTTKKIIDQYQKTLGDIDLWHSHYEKMLENLKKLKDINNKLRRQIRHRIGEGLDMDDMS
gm030127_Glyma1 GLTTKRIIDQYQKTLGDIDLWRSHYEKMLENLKKLIDINNKLRRQI--RIGEGLDMDDMS
                . :**.: * **   . :*:* ::**          . *.:*: :*  *:*:   ::::.

AT3G54340.1     IQELRRLEDEMENTFKLVRERKFKSLGNQIETTKKKNKSQQDIQKNLIHELELR-AEDPH
gm013895_Glyma0 MEDLKLLEEEMDKAAKVVRERKYKVITNQIDTQRKKFNNEKEVHNRLLRDLDAR-AEDPR
gm030126_Glyma1 FQQLRTLEEDLVSSIGKIRERKFHVIKTRTDTCRKKVKSLEQMNRDLLFELKEKCAIHPQ
gm001714_Glyma0 FQQLRTLEEDMVSSIGKIRERKFHVIKTRTDTCRKKVKSLKQMNGNLLLELKEKCVIHPQ
pt001022_POPTR_ IDHLRVLEQNMTEALNGVRGRKYHVIKTQTETYKKKVRSLEERHGNLWMEY---------
gm001715_Glyma0 FQQLRTLEEDMVSSIGKIRERKFHVIKTRTDTCRKKVKSLKQMNGNLLLELETR------
gm030127_Glyma1 FQQLRTLEEDLVSSIGKIRERKFHVIKTRTDTCRKKVKSLEQMNRDLLFEL-EKCAIHPQ
                ::.*: **::: .:   :* **:: : .: :* :** .. :: :  *  :          

AT3G54340.1     YGLVDNGGDYDS-------VLGYQIEGSRAYALRFHQNHHH-YYPNH---GLHAPSA---
gm013895_Glyma0 FALIDNGGEYES-------VIGFSNLGPRMFALSLQPSH---------------PSAQSG
gm030126_Glyma1 F-ILHDEGDEES-------AVALANGASTLYAF-CHQHHSHLNLPSHHSHGEE-PFK---
gm001714_Glyma0 F-LLHDEGDEESAAAAAAAAVALANGASTLYAF-CHQHHSHLNLFSHHSNGEEQPFK---
pt001022_POPTR_ ---VRIEGDYES-------AAALVNGASNLYAFRLHQGHHH-HHPNLHLAGGFGP-----
gm001715_Glyma0 --------NQQQ-----------------------QQQQQQLHWPTV-------PPP---
gm030127_Glyma1 F-ILHDEGDEES-------AVALANGASTLYAF-CHQHHSHLNLPSHHSHGEE-PFK---
                        : :.                       :  :               *     

AT3G54340.1     ---SDIITFHLLE
gm013895_Glyma0 AAGSDLTTYPLLF
gm030126_Glyma1 -TD-DLRLA----
gm001714_Glyma0 -TDHDLRLA----
pt001022_POPTR_ ---HDLRLP----
gm001715_Glyma0 -CMHSVISTILI-
gm030127_Glyma1 -TD-DLRLA----
                    .:
BoxShade v3.31 C (beta, 970507) Output
AT3G54340.1     M A R G K I Q I K R I E N Q T N R Q V T Y S K R R N G L F K K A H E L T V L C D A R V S I I M F S S S N K L H E Y I S P
gm013895_Glyma0    M A R G K I Q I K R I E N T T N R Q V T Y S K R R N G L F K K A N E L T V L C D A K V S I I M F S S T G K L H E Y I S P
gm030126_Glyma1    M G R G K I E I K L I E N P T N R Q V T Y S K R R N G I F K K A H E L S V L C D A K V S L I M F S K N N K M H E Y I S P
gm001714_Glyma0    M G R G K I E I K L I E N P T N R Q V T Y S K R R N G I F K K A H E L S V L C D A K V S L I M F S K N N K M H E Y I S P
pt001022_POPTR_    M G R G K I E I K K I E N P T N R Q V T Y S K R R N G I F K K A Q E L T V L C D A K V S L I M F S N T N K F H E Y I S P
gm001715_Glyma0    M G R G K I E I K L I E N P T N R Q V T Y S K R R N G I F K K A H E L S V L C D A K V S L I M F S K N N K M H E Y I S P
gm030127_Glyma1    M G R G K I E I K L I E N P T N R Q V T Y S K R R N G I F K K A H E L S V L C D A K V S L I M F S K N N K M H E Y I S P
 
AT3G54340.1     N T T T K E I V D L Y Q T I S D - V D V W A T Q Y E R M Q E T K R K L L E T N R N L R T Q I K Q R L G E - - C L D E L D
gm013895_Glyma0    S T S T K Q F F D Q Y Q M T L G - V D L W N S H Y E N M Q E N L K K L K D V N R N L R K E I R Q R M G D - - C L N D L G
gm030126_Glyma1    G L T T K R I I D Q Y Q K T L G D I D L W R S H Y E K M L E N L K K L I D I N N K L R R Q I - - R I G E G L D M D D M S
gm001714_Glyma0    G L T T K K I I D Q Y Q K T L G D I D L W H S H Y E K M L E N L K K L K D I N N K L R R Q I R H R I G E G L D M D D M S
pt001022_POPTR_    S T T T K K I Y D Q Y Q K A L G - I D L W S A Q Y E - - - - - - - - - I S I N H K L K K E I R Q R I G E - - D L N E L S
gm001715_Glyma0    G L T T K K I I D Q Y Q K T L G D I D L W H S H Y E K M L E N L K K L K D I N N K L R R Q I R H R I G E G L D M D D M S
gm030127_Glyma1    G L T T K R I I D Q Y Q K T L G D I D L W R S H Y E K M L E N L K K L I D I N N K L R R Q I - - R I G E G L D M D D M S
 
AT3G54340.1     I Q E L R R L E D E M E N T F K L V R E R K F K S L G N Q I E T T K K K N K S Q Q D I Q K N L I H E L E L R - A E D P H
gm013895_Glyma0    M E D L K L L E E E M D K A A K V V R E R K Y K V I T N Q I D T Q R K K F N N E K E V H N R L L R D L D A R - A E D P R
gm030126_Glyma1    F Q Q L R T L E E D L V S S I G K I R E R K F H V I K T R T D T C R K K V K S L E Q M N R D L L F E L K E K C A I H P Q
gm001714_Glyma0    F Q Q L R T L E E D M V S S I G K I R E R K F H V I K T R T D T C R K K V K S L K Q M N G N L L L E L K E K C V I H P Q
pt001022_POPTR_    I D H L R V L E Q N M T E A L N G V R G R K Y H V I K T Q T E T Y K K K V R S L E E R H G N L W M E Y - - - - - - - - -
gm001715_Glyma0    F Q Q L R T L E E D M V S S I G K I R E R K F H V I K T R T D T C R K K V K S L K Q M N G N L L L E L E T R - - - - - -
gm030127_Glyma1    F Q Q L R T L E E D L V S S I G K I R E R K F H V I K T R T D T C R K K V K S L E Q M N R D L L F E L - E K C A I H P Q
 
AT3G54340.1     Y G L V D N G G D Y D S - - - - - - - V L G Y Q I E G S R A Y A L R F H Q N H H H - Y Y P N H - - - G L H A P S A - - -
gm013895_Glyma0    F A L I D N G G E Y E S - - - - - - - V I G F S N L G P R M F A L S L Q P S H - - - - - - - - - - - - - - - P S A Q S G
gm030126_Glyma1    F - I L H D E G D E E S - - - - - - - A V A L A N G A S T L Y A F - C H Q H H S H L N L P S H H S H G E E - P F K - - -
gm001714_Glyma0    F - L L H D E G D E E S A A A A A A A A V A L A N G A S T L Y A F - C H Q H H S H L N L F S H H S N G E E Q P F K - - -
pt001022_POPTR_    - - - V R I E G D Y E S - - - - - - - A A A L V N G A S N L Y A F R L H Q G H H H - H H P N L H L A G G F G P - - - - -
gm001715_Glyma0    - - - - - - - - N Q Q Q - - - - - - - - - - - - - - - - - - - - - - - Q Q Q Q Q Q L H W P T V - - - - - - - P P P - - -
gm030127_Glyma1    F - I L H D E G D E E S - - - - - - - A V A L A N G A S T L Y A F - C H Q H H S H L N L P S H H S H G E E - P F K - - -
 
AT3G54340.1     - - - S D I I T F H L L E
gm013895_Glyma0    A A G S D L T T Y P L L F
gm030126_Glyma1    - T D - D L R L A - - - -
gm001714_Glyma0    - T D H D L R L A - - - -
pt001022_POPTR_    - - - H D L R L P - - - -
gm001715_Glyma0    - C M H S V I S T I L I -
gm030127_Glyma1    - T D - D L R L A - - - -
 
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