fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G54990.2 MLDLNLKIFSS at 0/346 in AT3G54990.1
GNGHNDLELSLGISSS at 269/346 in AT3G54990.1
MLDLNLKIFSS at 0/247 in AT3G54990.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm037963 MLDLNLTAEST in 1/476 AT2G28550.1 1st_not 0.405 II
EGGSHDLDLSLGIATP in 306/476
Pt043227 MLDLNLGITYS in 1/506 AT4G36920.1 1st_not 0.41 II
GGSGHNLDLSLGISQP in 338/506
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G54990.2     MLDLNLKI-FSSYNEDQDRKVPLMI---------------STTGEEESNSSSSSTTDSAA
gm037963_Glyma1 MLDLNL---TAESTQNDE----LLVLLD--------------KFPEASSGTSNSSIVNAE
pt043227_POPTR_ MLDLNLGITYSDSSCDDNNKNGMMVIVDVENHHHQEEEEASRTRQMEDSAASNSSTINTT
                ******    :. . :::    :::                 .    ...:*.*:  .: 

AT3G54990.2     RD---------A-----FIAFGILKRD--DDLVPPPPPPPHKETG--------DLFPVVA
gm037963_Glyma1 GSSNEDSCSTRAGDVFTFN-FGILKVEAANDVVAAA---------------TKELFPVSS
pt043227_POPTR_ EDENSSNNSNSA-----FI-FDILKKD--ENFTSTTTIDASKQTNPNCDFTTQQLSP---
                 .         *     *  *.*** :  ::.....                 :* *   

AT3G54990.2     ----DARRNIEFSVEDS---------HWLNLSSLQ----------RNTQKMVKKSRRGPR
gm037963_Glyma1 ENWQGQSSTSLFQARKSL----------MDLSLDQQHGEVKV-VQVQPQPKVKKSRRGPR
pt043227_POPTR_ -----QRSGLEFNLQPGLAGTTATRPQWLKLSQMGSSGEAELRIVQQKQQQARKSRRGPR
                           *. . .           :.**              : *  .:*******

AT3G54990.2     SRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAYAAARAYDRAAIKFRGLDADINF
gm037963_Glyma1 SRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLDADINF
pt043227_POPTR_ SRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHTAARAYDRAAIKFRGVDADINF
                *************************************::**************:******

AT3G54990.2     VVDDYRHDIDKMKNLNKVEFVQTLRRESASFGRGSSKYKGLALQKC-------TQFKTHD
gm037963_Glyma1 NLVDYEEDLKQMKNLSKEEFVHILRRHSSGFSRGSSKYRGVTLHKCGRWEARMGQFLGKK
pt043227_POPTR_ NLSDYEEDMKQMKNLNKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKK
                 : **..*:.:****.* ***: ***.*:.*.******:*::*:**        **  :.

AT3G54990.2     QIHL--------------------------------------------------------
gm037963_Glyma1 YIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFEPSTYESEMKPEAINEGGS-HDLDLSL
pt043227_POPTR_ YIYLGLFDSEVEAARAYDKAALNCNGREAVTNFEPSVYKGDTVFDT-NYGGSGHNLDLSL
                 *:*                                                        

AT3G54990.2     ------------------------------------------------------------
gm037963_Glyma1 GIATPGHGPKEN----RGHLQFQ--SIPYNMHPGRSSMMETNINSVIGDPSLKRLVVTEE
pt043227_POPTR_ GISQPTNDPKGNDNLGDGHCSFGGCEIPIKE---RQAKAEGTAAARMGLETLHGLPIASR
                                                                            

AT3G54990.2     ------------------------------------------------------------
gm037963_Glyma1 RPSVWNAAYSTFFPNLERA--ERMGTDPSKGVPNP---NWAWQTHG--QVTDTPVPPFST
pt043227_POPTR_ NLPTW----SGMFPGLASSYEERTPEKRFEAVSPPRFSSWPWQINGSNSVAAT-MPQLCV
                                                                            

AT3G54990.2     -------------------FQNRYHFV----RHVIF------------------------
gm037963_Glyma1 AASSGFSISA-TFPSTAI-FPTKS--INSVPHSLCFTSPSTPGSNAPQFYNYYEVKSPQP
pt043227_POPTR_ AASSGFSSSTKTVPSATLPFNQQNHFANNNPRLAAFTTSAT----NPSFYYSYTS-----
                                   *  :        :   *                        

AT3G54990.2     --
gm037963_Glyma1 PS
pt043227_POPTR_ --
BoxShade v3.31 C (beta, 970507) Output
AT3G54990.2     M L D L N L K I - F S S Y N E D Q D R K V P L M I - - - - - - - - - - - - - - - S T T G E E E S N S S S S S T T D S A A
gm037963_Glyma1    M L D L N L - - - T A E S T Q N D E - - - - L L V L L D - - - - - - - - - - - - - - K F P E A S S G T S N S S I V N A E
pt043227_POPTR_    M L D L N L G I T Y S D S S C D D N N K N G M M V I V D V E N H H H Q E E E E A S R T R Q M E D S A A S N S S T I N T T
 
AT3G54990.2     R D - - - - - - - - - A - - - - - F I A F G I L K R D - - D D L V P P P P P P P H K E T G - - - - - - - - D L F P V V A
gm037963_Glyma1    G S S N E D S C S T R A G D V F T F N - F G I L K V E A A N D V V A A A - - - - - - - - - - - - - - - T K E L F P V S S
pt043227_POPTR_    E D E N S S N N S N S A - - - - - F I - F D I L K K D - - E N F T S T T T I D A S K Q T N P N C D F T T Q Q L S P - - -
 
AT3G54990.2     - - - - D A R R N I E F S V E D S - - - - - - - - - H W L N L S S L Q - - - - - - - - - - R N T Q K M V K K S R R G P R
gm037963_Glyma1    E N W Q G Q S S T S L F Q A R K S L - - - - - - - - - - M D L S L D Q Q H G E V K V - V Q V Q P Q P K V K K S R R G P R
pt043227_POPTR_    - - - - - Q R S G L E F N L Q P G L A G T T A T R P Q W L K L S Q M G S S G E A E L R I V Q Q K Q Q Q A R K S R R G P R
 
AT3G54990.2     S R S S Q Y R G V T F Y R R T G R W E S H I W D C G K Q V Y L G G F D T A Y A A A R A Y D R A A I K F R G L D A D I N F
gm037963_Glyma1    S R S S Q Y R G V T F Y R R T G R W E S H I W D C G K Q V Y L G G F D T A H A A A R A Y D R A A I K F R G L D A D I N F
pt043227_POPTR_    S R S S Q Y R G V T F Y R R T G R W E S H I W D C G K Q V Y L G G F D T A H T A A R A Y D R A A I K F R G V D A D I N F
 
AT3G54990.2     V V D D Y R H D I D K M K N L N K V E F V Q T L R R E S A S F G R G S S K Y K G L A L Q K C - - - - - - - T Q F K T H D
gm037963_Glyma1    N L V D Y E E D L K Q M K N L S K E E F V H I L R R H S S G F S R G S S K Y R G V T L H K C G R W E A R M G Q F L G K K
pt043227_POPTR_    N L S D Y E E D M K Q M K N L N K E E F V H I L R R Q S T G F S R G S S K Y R G V T L H K C G R W E A R M G Q F L G K K
 
AT3G54990.2     Q I H L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm037963_Glyma1    Y I Y L G L F D S E V E A A R A Y D K A A I K C N G R E A V T N F E P S T Y E S E M K P E A I N E G G S - H D L D L S L
pt043227_POPTR_    Y I Y L G L F D S E V E A A R A Y D K A A L N C N G R E A V T N F E P S V Y K G D T V F D T - N Y G G S G H N L D L S L
 
AT3G54990.2     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm037963_Glyma1    G I A T P G H G P K E N - - - - R G H L Q F Q - - S I P Y N M H P G R S S M M E T N I N S V I G D P S L K R L V V T E E
pt043227_POPTR_    G I S Q P T N D P K G N D N L G D G H C S F G G C E I P I K E - - - R Q A K A E G T A A A R M G L E T L H G L P I A S R
 
AT3G54990.2     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm037963_Glyma1    R P S V W N A A Y S T F F P N L E R A - - E R M G T D P S K G V P N P - - - N W A W Q T H G - - Q V T D T P V P P F S T
pt043227_POPTR_    N L P T W - - - - S G M F P G L A S S Y E E R T P E K R F E A V S P P R F S S W P W Q I N G S N S V A A T - M P Q L C V
 
AT3G54990.2     - - - - - - - - - - - - - - - - - - - F Q N R Y H F V - - - - R H V I F - - - - - - - - - - - - - - - - - - - - - - - -
gm037963_Glyma1    A A S S G F S I S A - T F P S T A I - F P T K S - - I N S V P H S L C F T S P S T P G S N A P Q F Y N Y Y E V K S P Q P
pt043227_POPTR_    A A S S G F S S S T K T V P S A T L P F N Q Q N H F A N N N P R L A A F T T S A T - - - - N P S F Y Y S Y T S - - - - -
 
AT3G54990.2     - -
gm037963_Glyma1    P S
pt043227_POPTR_    - -
 
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