fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G54990.2 MLDLNLKIFSS at 0/346 in AT3G54990.1
GNGHNDLELSLGISSS at 269/346 in AT3G54990.1
MLDLNLKIFSS at 0/247 in AT3G54990.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm037963 MLDLNLTAEST in 1/476 AT2G28550.1 1st_not 0.405 II
EGGSHDLDLSLGIATP in 306/476
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G54990.2     MLDLNLKIFSSYNEDQDRKVPLMI-------STTGEEES---NSSSSSTTDSA---ARDA
gm037963_Glyma1 MLDLNLTAESTQNDE------LLVLLDKFPEASSGTSNSSIVNAEGSSNEDSCSTRAGDV
                ******.  *: *::      *::       :::* .:*   *:..**. **.   * *.

AT3G54990.2     F-IAFGILKRD--DDLVPPPPPPPHKETGDLFPVVAD------------ARRNI-EFSVE
gm037963_Glyma1 FTFNFGILKVEAANDVVA-------AATKELFPVSSENWQGQSSTSLFQARKSLMDLSLD
                * : ***** :  :*:*.         * :**** ::            **:.: ::*::

AT3G54990.2     DSHWLNLSSLQRNTQKMVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGF
gm037963_Glyma1 QQHG-EVKVVQVQPQPKVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGF
                :.*  ::. :* :.*  *******************************************

AT3G54990.2     DTAYAAARAYDRAAIKFRGLDADINFVVDDYRHDIDKMKNLNKVEFVQTLRRESASFGRG
gm037963_Glyma1 DTAHAAARAYDRAAIKFRGLDADINFNLVDYEEDLKQMKNLSKEEFVHILRRHSSGFSRG
                ***:********************** : **..*:.:****.* ***: ***.*:.*.**

AT3G54990.2     SSKYKGLALQKC-------TQF--KTHDQIHLF---------------------------
gm037963_Glyma1 SSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFE
                ****:*::*:**        **  *.:  : **                           

AT3G54990.2     -----------------------------------QNRYH--------------------
gm037963_Glyma1 PSTYESEMKPEAINEGGSHDLDLSLGIATPGHGPKENRGHLQFQSIPYNMHPGRSSMMET
                                                   :** *                    

AT3G54990.2     ------------------------------------------------------------
gm037963_Glyma1 NINSVIGDPSLKRLVVTEERPSVWNAAYSTFFPNLERAERMGTDPSKGVPNPNWAWQTHG
                                                                            

AT3G54990.2     -----------------------FVRHVIF------------------------------
gm037963_Glyma1 QVTDTPVPPFSTAASSGFSISATFPSTAIFPTKSINSVPHSLCFTSPSTPGSNAPQFYNY
                                       *   .**                              

AT3G54990.2     ----------
gm037963_Glyma1 YEVKSPQPPS
BoxShade v3.31 C (beta, 970507) Output
AT3G54990.2     M L D L N L K I F S S Y N E D Q D R K V P L M I - - - - - - - S T T G E E E S - - - N S S S S S T T D S A - - - A R D A
gm037963_Glyma1    M L D L N L T A E S T Q N D E - - - - - - L L V L L D K F P E A S S G T S N S S I V N A E G S S N E D S C S T R A G D V
 
AT3G54990.2     F - I A F G I L K R D - - D D L V P P P P P P P H K E T G D L F P V V A D - - - - - - - - - - - - A R R N I - E F S V E
gm037963_Glyma1    F T F N F G I L K V E A A N D V V A - - - - - - - A A T K E L F P V S S E N W Q G Q S S T S L F Q A R K S L M D L S L D
 
AT3G54990.2     D S H W L N L S S L Q R N T Q K M V K K S R R G P R S R S S Q Y R G V T F Y R R T G R W E S H I W D C G K Q V Y L G G F
gm037963_Glyma1    Q Q H G - E V K V V Q V Q P Q P K V K K S R R G P R S R S S Q Y R G V T F Y R R T G R W E S H I W D C G K Q V Y L G G F
 
AT3G54990.2     D T A Y A A A R A Y D R A A I K F R G L D A D I N F V V D D Y R H D I D K M K N L N K V E F V Q T L R R E S A S F G R G
gm037963_Glyma1    D T A H A A A R A Y D R A A I K F R G L D A D I N F N L V D Y E E D L K Q M K N L S K E E F V H I L R R H S S G F S R G
 
AT3G54990.2     S S K Y K G L A L Q K C - - - - - - - T Q F - - K T H D Q I H L F - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm037963_Glyma1    S S K Y R G V T L H K C G R W E A R M G Q F L G K K Y I Y L G L F D S E V E A A R A Y D K A A I K C N G R E A V T N F E
 
AT3G54990.2     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Q N R Y H - - - - - - - - - - - - - - - - - - - -
gm037963_Glyma1    P S T Y E S E M K P E A I N E G G S H D L D L S L G I A T P G H G P K E N R G H L Q F Q S I P Y N M H P G R S S M M E T
 
AT3G54990.2     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm037963_Glyma1    N I N S V I G D P S L K R L V V T E E R P S V W N A A Y S T F F P N L E R A E R M G T D P S K G V P N P N W A W Q T H G
 
AT3G54990.2     - - - - - - - - - - - - - - - - - - - - - - - F V R H V I F - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm037963_Glyma1    Q V T D T P V P P F S T A A S S G F S I S A T F P S T A I F P T K S I N S V P H S L C F T S P S T P G S N A P Q F Y N Y
 
AT3G54990.2     - - - - - - - - - -
gm037963_Glyma1    Y E V K S P Q P P S
 
0