fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G55370.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030895 not found in 325aa AT3G55370.1 1st_1st 0.315789473 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G55370.1     MVFSSLPVNQFDSQNWQQQGNQHQLECVTTDQNPNNYLRQLSSPPTSQVAGS-SQARVNS
gm030895_Glyma1 MVFSSIPVF-VDPPNWQQQPNNHPQ--ANNNGGDNTQLLPPLPPHQSHVGGSVGSIRPGS
                *****:**  .*. ***** *:*    ...: . *. *    .*  *:*.** .. * .*

AT3G55370.1     MVERARIAKVPLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRNV
gm030895_Glyma1 MADRARLAKLPPPEAALKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNV
                *.:***:**:* *****:*******************:*****************:****

AT3G55370.1     PVGGGFRRNKRSKSRSKSTVVVSTDNTTSTSSLTSRPSYSNPSKFHSYG-QIPEFNSNLP
gm030895_Glyma1 PVGGGCRRNKKNKRSSRSKSPASSEKQQTLSGSTSAIVPSGGTTHEQIGHQLPQ-PQNLP
                ***** ****:.*  *:*.  .*:::  : *. **    *. :.... * *:*:  .***

AT3G55370.1     ILPPLQSLGDYNSSNTGLDFG---------GTQISNMISGMSSSGGILDAWRIPPSQQAQ
gm030895_Glyma1 FLASLQNLNRYAVGNMGLGLREIHGQNENMGFQIGN-----SSAGGGMDQWRL-----HQ
                :*..**.*. *  .* **.:          * **.*     **:** :* **:      *

AT3G55370.1     QFPFLINTTGLVQSSNALYPLLEGGVSATQTRNVKAEENDQDRGRDGDGVNNLSRNFLGN
gm030895_Glyma1 QVPFF---NGFESTSAGSYPFQNEGINETPSGFLRCHRLKWRK----SGALNLSRSTLNN
                *.**:   .*: .:* . **: : *:. * :  ::... .  :    .*. ****. *.*

AT3G55370.1     I--NINS-----------------GRNEEYTSWGGNSSWTGFTSNNSTGHLSF
gm030895_Glyma1 VLQKITSTIHGLICQVLLLFLLLISCNFEHIT----CMWSITTSPELLCP---
                :  :*.*                 . * *: :    . *:  ** :
BoxShade v3.31 C (beta, 970507) Output
AT3G55370.1     M V F S S L P V N Q F D S Q N W Q Q Q G N Q H Q L E C V T T D Q N P N N Y L R Q L S S P P T S Q V A G S - S Q A R V N S
gm030895_Glyma1    M V F S S I P V F - V D P P N W Q Q Q P N N H P Q - - A N N N G G D N T Q L L P P L P P H Q S H V G G S V G S I R P G S
 
AT3G55370.1     M V E R A R I A K V P L P E A A L N C P R C D S T N T K F C Y F N N Y S L T Q P R H F C K T C R R Y W T R G G S L R N V
gm030895_Glyma1    M A D R A R L A K L P P P E A A L K C P R C D S T N T K F C Y F N N Y S L S Q P R H F C K T C R R Y W T R G G A L R N V
 
AT3G55370.1     P V G G G F R R N K R S K S R S K S T V V V S T D N T T S T S S L T S R P S Y S N P S K F H S Y G - Q I P E F N S N L P
gm030895_Glyma1    P V G G G C R R N K K N K R S S R S K S P A S S E K Q Q T L S G S T S A I V P S G G T T H E Q I G H Q L P Q - P Q N L P
 
AT3G55370.1     I L P P L Q S L G D Y N S S N T G L D F G - - - - - - - - - G T Q I S N M I S G M S S S G G I L D A W R I P P S Q Q A Q
gm030895_Glyma1    F L A S L Q N L N R Y A V G N M G L G L R E I H G Q N E N M G F Q I G N - - - - - S S A G G G M D Q W R L - - - - - H Q
 
AT3G55370.1     Q F P F L I N T T G L V Q S S N A L Y P L L E G G V S A T Q T R N V K A E E N D Q D R G R D G D G V N N L S R N F L G N
gm030895_Glyma1    Q V P F F - - - N G F E S T S A G S Y P F Q N E G I N E T P S G F L R C H R L K W R K - - - - S G A L N L S R S T L N N
 
AT3G55370.1     I - - N I N S - - - - - - - - - - - - - - - - - G R N E E Y T S W G G N S S W T G F T S N N S T G H L S F
gm030895_Glyma1    V L Q K I T S T I H G L I C Q V L L L F L L L I S C N F E H I T - - - - C M W S I T T S P E L L C P - - -
 
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