fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G55560.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm031763 not found in 289aa AT3G55560.1 not_1st 0.423963133 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G55560.1     MANPWWVGNVAIGGVESPVTSSAPSLHHRNSNNNNPPTMTRSDPRLDHDFTTNNSGSPNT
gm031763_Glyma1 MANRWWTGNVGMIREQELM---------ENSNNNNATT------------TPTNSSNSNT
                *** **.***.:   :. :         .******..*            *..**...**

AT3G55560.1     --QTQSQEEQNSRDEQPAVE-------PGSGSGSTGRRPRGRPPGSKNKPKSPVVVTKES
gm031763_Glyma1 NANTNTTEEEVSRDNGEDLQNQNLGSHEGSEPGSSGRRPRGRPPGSKNKPKPPIVITKES
                  :*:: **: ***:   ::        ** .**:****************.*:*:****

AT3G55560.1     PNSLQSHVLEIATGADVAESLNAFARRRGRGVSVLSGSGLVTNVTLRQPAASGGVVSLRG
gm031763_Glyma1 PNALRSHVLEITSGSDVAESIAAFANRRHRGVSVLSGSGIVANVTLRQPAAPAGVITLHG
                **:*:******::*:*****: ***.** **********:*:*********..**::*:*

AT3G55560.1     QFEILSMCGAFLPTSGSPAAAAGLTIYLAGAQGQVVGGGVAGPLIASGPVIVIAATFCNA
gm031763_Glyma1 RFEILSLSGAFLP-SPSPPGATGLTVYLAGGQGQVVGGTVAGSLVASGPVMVIAATFANA
                :*****:.***** * **..*:***:****.******* ***.*:*****:******.**

AT3G55560.1     TYERLPIEEEQQQEQPLQLEDGKKQKEENDDNESGNNGNEGSMQPPMYNMPPNFIPNGHQ
gm031763_Glyma1 TYERLPLEDEQGEEG-MQVQ---QQQQQQQQQQSQGLGEQVSM--PMYNLPPNLLHNGQN
                ******:*:** :*  :*::   :*::::::::* . *:: **  ****:***:: **::

AT3G55560.1     MAQHDVYWGGPPPRAPPSY
gm031763_Glyma1 MP-HDVLWGA-PPRPPPSF
                *. *** **. ***.***:
BoxShade v3.31 C (beta, 970507) Output
AT3G55560.1     M A N P W W V G N V A I G G V E S P V T S S A P S L H H R N S N N N N P P T M T R S D P R L D H D F T T N N S G S P N T
gm031763_Glyma1    M A N R W W T G N V G M I R E Q E L M - - - - - - - - - E N S N N N N A T T - - - - - - - - - - - - T P T N S S N S N T
 
AT3G55560.1     - - Q T Q S Q E E Q N S R D E Q P A V E - - - - - - - P G S G S G S T G R R P R G R P P G S K N K P K S P V V V T K E S
gm031763_Glyma1    N A N T N T T E E E V S R D N G E D L Q N Q N L G S H E G S E P G S S G R R P R G R P P G S K N K P K P P I V I T K E S
 
AT3G55560.1     P N S L Q S H V L E I A T G A D V A E S L N A F A R R R G R G V S V L S G S G L V T N V T L R Q P A A S G G V V S L R G
gm031763_Glyma1    P N A L R S H V L E I T S G S D V A E S I A A F A N R R H R G V S V L S G S G I V A N V T L R Q P A A P A G V I T L H G
 
AT3G55560.1     Q F E I L S M C G A F L P T S G S P A A A A G L T I Y L A G A Q G Q V V G G G V A G P L I A S G P V I V I A A T F C N A
gm031763_Glyma1    R F E I L S L S G A F L P - S P S P P G A T G L T V Y L A G G Q G Q V V G G T V A G S L V A S G P V M V I A A T F A N A
 
AT3G55560.1     T Y E R L P I E E E Q Q Q E Q P L Q L E D G K K Q K E E N D D N E S G N N G N E G S M Q P P M Y N M P P N F I P N G H Q
gm031763_Glyma1    T Y E R L P L E D E Q G E E G - M Q V Q - - - Q Q Q Q Q Q Q Q Q Q S Q G L G E Q V S M - - P M Y N L P P N L L H N G Q N
 
AT3G55560.1     M A Q H D V Y W G G P P P R A P P S Y
gm031763_Glyma1    M P - H D V L W G A - P P R P P P S F
 
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