Input
| Putative repression domain
|
|
AT3G55560.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Os012353 |
not found in 258aa |
AT3G55560.1 |
1st_1st |
0.304147465 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT3G55560.1 MANPWWVGNVAIGGVESPVTSSAPSLHHRNSNNNNPPTMTRSDPRLDHDFTTNNSGSPNT
Os012353_Os03t0 -----------MGSID------GHSLQQ-------------------HQGYSHGGGAGGS
:*.:: . **:: *: ::..*: .:
AT3G55560.1 QTQSQEEQNSRDEQPAVEPGSGSGSTGRRPRGRPPGSKNKPKSPVVVTKESPNSLQSHVL
Os012353_Os03t0 ---NEEEEAS----PPPGGGSATGSAGRRPRGRPPGSKNKPKPPVVVTRESPNAMRSHVL
.:**: * *. **.:**:****************.*****:****:::****
AT3G55560.1 EIATGADVAESLNAFARRRGRGVSVLSGSGLVTNVTLRQPAASG-GVVSLRGQFEILSMC
Os012353_Os03t0 EIASGADIVEAIAGFSRRRQRGVSVLSGSGAVTNVTLRQPAGTGAAAVALRGRFEILSMS
***:***:.*:: .*:*** ********** **********.:* ..*:***:******.
AT3G55560.1 GAFLPTSGSPAAAAGLTIYLAGAQGQVVGGGVAGPLIASGPVIVIAATFCNATYERLPIE
Os012353_Os03t0 GAFLPAP-APPGATGLAVYLAGGQGQVVGGSVMGELIASGPVMVIAATFGNATYERLPLD
*****:. :*..*:**::****.*******.* * *******:****** ********::
AT3G55560.1 EEQQQEQPLQLEDGKKQKEENDDNESGNNGNEGSMQPPMY----NMPPNFIPNGHQMAQH
Os012353_Os03t0 QEGEEGAVLSGSEGAAAQMEQ--QSSGG----AVVPPPMYAAVQQTPP-----------H
:* :: *. .:* : *: :.**. . : **** : ** *
AT3G55560.1 DVY--WG-GPPPRAPPSY-
Os012353_Os03t0 DMFGQWGHAAVARPPPTSF
*:: ** .. .*.**:
BoxShade v3.31 C (beta, 970507) Output
AT3G55560.1 |
M |
A |
N |
P |
W |
W |
V |
G |
N |
V |
A |
I |
G |
G |
V |
E |
S |
P |
V |
T |
S |
S |
A |
P |
S |
L |
H |
H |
R |
N |
S |
N |
N |
N |
N |
P |
P |
T |
M |
T |
R |
S |
D |
P |
R |
L |
D |
H |
D |
F |
T |
T |
N |
N |
S |
G |
S |
P |
N |
T |
Os012353_Os03t0 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
G |
S |
I |
D |
- |
- |
- |
- |
- |
- |
G |
H |
S |
L |
Q |
Q |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
H |
Q |
G |
Y |
S |
H |
G |
G |
G |
A |
G |
G |
S |
|
AT3G55560.1 |
Q |
T |
Q |
S |
Q |
E |
E |
Q |
N |
S |
R |
D |
E |
Q |
P |
A |
V |
E |
P |
G |
S |
G |
S |
G |
S |
T |
G |
R |
R |
P |
R |
G |
R |
P |
P |
G |
S |
K |
N |
K |
P |
K |
S |
P |
V |
V |
V |
T |
K |
E |
S |
P |
N |
S |
L |
Q |
S |
H |
V |
L |
Os012353_Os03t0 |
- |
- |
- |
N |
E |
E |
E |
E |
A |
S |
- |
- |
- |
- |
P |
P |
P |
G |
G |
G |
S |
A |
T |
G |
S |
A |
G |
R |
R |
P |
R |
G |
R |
P |
P |
G |
S |
K |
N |
K |
P |
K |
P |
P |
V |
V |
V |
T |
R |
E |
S |
P |
N |
A |
M |
R |
S |
H |
V |
L |
|
AT3G55560.1 |
E |
I |
A |
T |
G |
A |
D |
V |
A |
E |
S |
L |
N |
A |
F |
A |
R |
R |
R |
G |
R |
G |
V |
S |
V |
L |
S |
G |
S |
G |
L |
V |
T |
N |
V |
T |
L |
R |
Q |
P |
A |
A |
S |
G |
- |
G |
V |
V |
S |
L |
R |
G |
Q |
F |
E |
I |
L |
S |
M |
C |
Os012353_Os03t0 |
E |
I |
A |
S |
G |
A |
D |
I |
V |
E |
A |
I |
A |
G |
F |
S |
R |
R |
R |
Q |
R |
G |
V |
S |
V |
L |
S |
G |
S |
G |
A |
V |
T |
N |
V |
T |
L |
R |
Q |
P |
A |
G |
T |
G |
A |
A |
A |
V |
A |
L |
R |
G |
R |
F |
E |
I |
L |
S |
M |
S |
|
AT3G55560.1 |
G |
A |
F |
L |
P |
T |
S |
G |
S |
P |
A |
A |
A |
A |
G |
L |
T |
I |
Y |
L |
A |
G |
A |
Q |
G |
Q |
V |
V |
G |
G |
G |
V |
A |
G |
P |
L |
I |
A |
S |
G |
P |
V |
I |
V |
I |
A |
A |
T |
F |
C |
N |
A |
T |
Y |
E |
R |
L |
P |
I |
E |
Os012353_Os03t0 |
G |
A |
F |
L |
P |
A |
P |
- |
A |
P |
P |
G |
A |
T |
G |
L |
A |
V |
Y |
L |
A |
G |
G |
Q |
G |
Q |
V |
V |
G |
G |
S |
V |
M |
G |
E |
L |
I |
A |
S |
G |
P |
V |
M |
V |
I |
A |
A |
T |
F |
G |
N |
A |
T |
Y |
E |
R |
L |
P |
L |
D |
|
AT3G55560.1 |
E |
E |
Q |
Q |
Q |
E |
Q |
P |
L |
Q |
L |
E |
D |
G |
K |
K |
Q |
K |
E |
E |
N |
D |
D |
N |
E |
S |
G |
N |
N |
G |
N |
E |
G |
S |
M |
Q |
P |
P |
M |
Y |
- |
- |
- |
- |
N |
M |
P |
P |
N |
F |
I |
P |
N |
G |
H |
Q |
M |
A |
Q |
H |
Os012353_Os03t0 |
Q |
E |
G |
E |
E |
G |
A |
V |
L |
S |
G |
S |
E |
G |
A |
A |
A |
Q |
M |
E |
Q |
- |
- |
Q |
S |
S |
G |
G |
- |
- |
- |
- |
A |
V |
V |
P |
P |
P |
M |
Y |
A |
A |
V |
Q |
Q |
T |
P |
P |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
H |
|
AT3G55560.1 |
D |
V |
Y |
- |
- |
W |
G |
- |
G |
P |
P |
P |
R |
A |
P |
P |
S |
Y |
- |
Os012353_Os03t0 |
D |
M |
F |
G |
Q |
W |
G |
H |
A |
A |
V |
A |
R |
P |
P |
P |
T |
S |
F |
|
|