fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G55560.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt035739 not found in 336aa AT3G55560.1 1st_1st 0.472350230 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G55560.1     MANPWWVGNVAIGGVESPVTSSAPSLHHRN-SNNNNPPTMTRSDPRLDHDFTTNNSGSPN
pt035739_POPTR_ MANRWWAGNVAMRGVD-PVSSS-PSLHLGNLEEDSTPPGLNRLGPRREQDFTDTNTSSPK
                *** **.****: **: **:** ****  * .::..** :.* .** ::*** .*:.**:

AT3G55560.1     T-------QTQSQEE-QNSRDEQPAVEPGS---------GSGSTGRRPRGRPPGSKNKPK
pt035739_POPTR_ TTTTATPPSTQNQEEHEDSRDNTNNQESGDHTALETIEPGSGSTSRRPRGRPAGSKNKPK
                *       .**.*** ::***:    *.*.         *****.*******.*******

AT3G55560.1     SPVVVTKESPNSLQSHVLEIATGADVAESLNAFARRRGRGVSVLSGSGLVTNVTLRQPAA
pt035739_POPTR_ PPIVITKESPNSLHSHVLEISSGSDIVESIATFSHRRHRGVSILSGSGIVNNVTLRQPAA
                .*:*:********:******::*:*:.**: :*::** ****:*****:*.*********

AT3G55560.1     SGGVVSLRGQFEILSMCGAFLPTSGSPAAAAGLTIYLAGAQGQVVGGGVAGPLIASGPVI
pt035739_POPTR_ PGGVITLHGRFEILSLSGSFLPAP-SPPGATGLTVYLAGGQGQVVGGTVMGELIAAGPVM
                .***::*:*:*****:.*:***:. **..*:***:****.******* * * ***:***:

AT3G55560.1     VIAATFCNATYERLPIEEEQQQEQPLQLEDGKKQKEENDDNES---------GNNGNEGS
pt035739_POPTR_ VIAATFSNATYERLPLEEQEQEG--MQLQQQVNSPGTNNGNAAAGGGASSGGGNNSVTQS
                ******.********:**::*:   :**::  :.   *:.* :         ***.   *

AT3G55560.1     MQP-------PMYNMPPNFIPNGHQMAQHDVYWGGPPPRAPPSY
pt035739_POPTR_ SQGLGEHVSIPGYNLPPNLLPNGQ--VPHDMFW-CPPPRPPPSY
                 *        * **:***::***:  . **::*  ****.****
BoxShade v3.31 C (beta, 970507) Output
AT3G55560.1     M A N P W W V G N V A I G G V E S P V T S S A P S L H H R N - S N N N N P P T M T R S D P R L D H D F T T N N S G S P N
pt035739_POPTR_    M A N R W W A G N V A M R G V D - P V S S S - P S L H L G N L E E D S T P P G L N R L G P R R E Q D F T D T N T S S P K
 
AT3G55560.1     T - - - - - - - Q T Q S Q E E - Q N S R D E Q P A V E P G S - - - - - - - - - G S G S T G R R P R G R P P G S K N K P K
pt035739_POPTR_    T T T T A T P P S T Q N Q E E H E D S R D N T N N Q E S G D H T A L E T I E P G S G S T S R R P R G R P A G S K N K P K
 
AT3G55560.1     S P V V V T K E S P N S L Q S H V L E I A T G A D V A E S L N A F A R R R G R G V S V L S G S G L V T N V T L R Q P A A
pt035739_POPTR_    P P I V I T K E S P N S L H S H V L E I S S G S D I V E S I A T F S H R R H R G V S I L S G S G I V N N V T L R Q P A A
 
AT3G55560.1     S G G V V S L R G Q F E I L S M C G A F L P T S G S P A A A A G L T I Y L A G A Q G Q V V G G G V A G P L I A S G P V I
pt035739_POPTR_    P G G V I T L H G R F E I L S L S G S F L P A P - S P P G A T G L T V Y L A G G Q G Q V V G G T V M G E L I A A G P V M
 
AT3G55560.1     V I A A T F C N A T Y E R L P I E E E Q Q Q E Q P L Q L E D G K K Q K E E N D D N E S - - - - - - - - - G N N G N E G S
pt035739_POPTR_    V I A A T F S N A T Y E R L P L E E Q E Q E G - - M Q L Q Q Q V N S P G T N N G N A A A G G G A S S G G G N N S V T Q S
 
AT3G55560.1     M Q P - - - - - - - P M Y N M P P N F I P N G H Q M A Q H D V Y W G G P P P R A P P S Y
pt035739_POPTR_    S Q G L G E H V S I P G Y N L P P N L L P N G Q - - V P H D M F W - C P P P R P P P S Y
 
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