fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G55560.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt035739 not found in 336aa AT3G55560.1 1st_1st 0.472350230 Ia
Pt042069 not found in 336aa AT3G04570.1 not_not 0.449308755 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G55560.1     MANPWWVGNVAIGGVESPVTSSAPSLHHRN-SNNNNPPTMTRSDPRLDHDFTTNNSGSPN
pt042069_POPTR_ MANRWWAGNVAMSGGD-PV-SSIPSLHLRNLEEESTPPGSNRLGPRREQNFIDTNTNSPK
pt035739_POPTR_ MANRWWAGNVAMRGVD-PV-SSSPSLHLGNLEEDSTPPGLNRLGPRREQDFTDTNTSSPK
                *** **.****: * : ** ** ****  * .::..**  .* .** :::*  .*:.**:

AT3G55560.1     -----------TQTQS---QEEQNSRDEQPAVEPGS---------GSGSTGRRPRGRPPG
pt042069_POPTR_ TTTTTTATAPSAQNQSQNREEQEDSRDNTNNQESGDHIAHETIEPGSGSTSRRPRGRPAG
pt035739_POPTR_ --TTTTATPPSTQNQ----EEHEDSRDNTNNQESGDHTALETIEPGSGSTSRRPRGRPAG
                           :*.*    :*.::***:    *.*.         *****.*******.*

AT3G55560.1     SKNKPKSPVVVTKESPNSLQSHVLEIATGADVAESLNAFARRRGRGVSVLSGSGLVTNVT
pt042069_POPTR_ SKNKPKPPVVITKESPNSLRSHVLEISSGSDIVDSIANFSHRRHHGVSILSGSGIVDNVT
pt035739_POPTR_ SKNKPKPPIVITKESPNSLHSHVLEISSGSDIVESIATFSHRRHRGVSILSGSGIVNNVT
                ******.*:*:********:******::*:*:.:*:  *::** :***:*****:* ***

AT3G55560.1     LRQPAASGGVVSLRGQFEILSMCGAFLPTSGSPAAAAGLTIYLAGAQGQVVGGGVAGPLI
pt042069_POPTR_ LRQPAAPGGVITLHGRFEILSLSGSFLPAP-SPPGATRLTVYLAGAQGQVVGGTVMGELV
pt035739_POPTR_ LRQPAAPGGVITLHGRFEILSLSGSFLPAP-SPPGATGLTVYLAGGQGQVVGGTVMGELI
                ******.***::*:*:*****:.*:***:. **..*: **:****.******* * * *:

AT3G55560.1     ASGPVIVIAATFCNATYERLPIEEEQQQEQPLQLEDGKKQKEENDDNESG------NNGN
pt042069_POPTR_ AAGPVMVIAATFSNATYERLPLEEQEQEG--MQLQQQVDSSGTNNGNAAA------GGGN
pt035739_POPTR_ AAGPVMVIAATFSNATYERLPLEEQEQEG--MQLQQQVNSPGTNNGNAAAGGGASSGGGN
                *:***:******.********:**::*:   :**::  ..   *:.* :.      ..**

AT3G55560.1     EGSMQP----------PMYNMPPNFIPNGHQMAQHDVYWGGPPPRAPPSY
pt042069_POPTR_ NSGTQSSQGLGEHGSIPVFNLPPNLLPNGQ--MPHDVFW-GPPPRPPPSY
pt035739_POPTR_ NSVTQSSQGLGEHVSIPGYNLPPNLLPNGQ--VPHDMFW-CPPPRPPPSY
                :.  *.          * :*:***::***:    **::*  ****.****
BoxShade v3.31 C (beta, 970507) Output
AT3G55560.1     M A N P W W V G N V A I G G V E S P V T S S A P S L H H R N - S N N N N P P T M T R S D P R L D H D F T T N N S G S P N
pt042069_POPTR_    M A N R W W A G N V A M S G G D - P V - S S I P S L H L R N L E E E S T P P G S N R L G P R R E Q N F I D T N T N S P K
pt035739_POPTR_    M A N R W W A G N V A M R G V D - P V - S S S P S L H L G N L E E D S T P P G L N R L G P R R E Q D F T D T N T S S P K
 
AT3G55560.1     - - - - - - - - - - - T Q T Q S - - - Q E E Q N S R D E Q P A V E P G S - - - - - - - - - G S G S T G R R P R G R P P G
pt042069_POPTR_    T T T T T T A T A P S A Q N Q S Q N R E E Q E D S R D N T N N Q E S G D H I A H E T I E P G S G S T S R R P R G R P A G
pt035739_POPTR_    - - T T T T A T P P S T Q N Q - - - - E E H E D S R D N T N N Q E S G D H T A L E T I E P G S G S T S R R P R G R P A G
 
AT3G55560.1     S K N K P K S P V V V T K E S P N S L Q S H V L E I A T G A D V A E S L N A F A R R R G R G V S V L S G S G L V T N V T
pt042069_POPTR_    S K N K P K P P V V I T K E S P N S L R S H V L E I S S G S D I V D S I A N F S H R R H H G V S I L S G S G I V D N V T
pt035739_POPTR_    S K N K P K P P I V I T K E S P N S L H S H V L E I S S G S D I V E S I A T F S H R R H R G V S I L S G S G I V N N V T
 
AT3G55560.1     L R Q P A A S G G V V S L R G Q F E I L S M C G A F L P T S G S P A A A A G L T I Y L A G A Q G Q V V G G G V A G P L I
pt042069_POPTR_    L R Q P A A P G G V I T L H G R F E I L S L S G S F L P A P - S P P G A T R L T V Y L A G A Q G Q V V G G T V M G E L V
pt035739_POPTR_    L R Q P A A P G G V I T L H G R F E I L S L S G S F L P A P - S P P G A T G L T V Y L A G G Q G Q V V G G T V M G E L I
 
AT3G55560.1     A S G P V I V I A A T F C N A T Y E R L P I E E E Q Q Q E Q P L Q L E D G K K Q K E E N D D N E S G - - - - - - N N G N
pt042069_POPTR_    A A G P V M V I A A T F S N A T Y E R L P L E E Q E Q E G - - M Q L Q Q Q V D S S G T N N G N A A A - - - - - - G G G N
pt035739_POPTR_    A A G P V M V I A A T F S N A T Y E R L P L E E Q E Q E G - - M Q L Q Q Q V N S P G T N N G N A A A G G G A S S G G G N
 
AT3G55560.1     E G S M Q P - - - - - - - - - - P M Y N M P P N F I P N G H Q M A Q H D V Y W G G P P P R A P P S Y
pt042069_POPTR_    N S G T Q S S Q G L G E H G S I P V F N L P P N L L P N G Q - - M P H D V F W - G P P P R P P P S Y
pt035739_POPTR_    N S V T Q S S Q G L G E H V S I P G Y N L P P N L L P N G Q - - V P H D M F W - C P P P R P P P S Y
 
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