fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G55560.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm048588 not found in 302aa AT3G55560.1 1st_1st 0.447004608 Ia
Gm031763 not found in 289aa AT3G55560.1 not_1st 0.423963133 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G55560.1     MANPWWVGNVAIGGVESPVTSSAPSLHHRNSNNNN----PPTMTRSDPRLDHDFTTNNSG
gm031763_Glyma1 MANRWWTGNVGMIREQELM---------ENSNNNN-----ATTTPTN-------SSNSNT
gm048588_Glyma1 MANRWWAGNVGMIREQELM---------ENSNNNNNNNNATTTTPTN-------SSNSNT
                *** **.***.:   :. :         .******     .* * ::       ::*.. 

AT3G55560.1     SPNTQTQSQEEQNSRD-------EQPAVEPGSGSGSTGRRPRGRPPGSKNKPKSPVVVTK
gm031763_Glyma1 NA--NTNTTEEEVSRDNGEDLQNQNLGSHEGSEPGSSGRRPRGRPPGSKNKPKPPIVITK
gm048588_Glyma1 NANTNTNTTEEEVSRDNGED-QNQNLGSHEGSEPGSSGRRPRGRPAGSKNKPKPPIVITK
                ..  :*:: **: ***       :: . . ** .**:********.*******.*:*:**

AT3G55560.1     ESPNSLQSHVLEIATGADVAESLNAFARRRGRGVSVLSGSGLVTNVTLRQPAASGGVVSL
gm031763_Glyma1 ESPNALRSHVLEITSGSDVAESIAAFANRRHRGVSVLSGSGIVANVTLRQPAAPAGVITL
gm048588_Glyma1 ESPNALRSHVLEIASGSDVAESIAAFANRRHRGVSVLSGSGIVANVTLRQPAAPAGVITL
                ****:*:******::*:*****: ***.** **********:*:*********..**::*

AT3G55560.1     RGQFEILSMCGAFLPTSGSPAAAAGLTIYLAGAQGQVVGGGVAGPLIASGPVIVIAATFC
gm031763_Glyma1 HGRFEILSLSGAFLP-SPSPPGATGLTVYLAGGQGQVVGGTVAGSLVASGPVMVIAATFA
gm048588_Glyma1 HGRFEILSLSGAFLP-SPSPSGATGLTVYLAGGQGQVVGGNVAGSLVASGPVMVIAATFA
                :*:*****:.***** * **..*:***:****.******* ***.*:*****:******.

AT3G55560.1     NATYERLPIEEEQQQEQPLQL----EDGKKQKEENDDNESGNNGNEGSMQPPMYNMPPNF
gm031763_Glyma1 NATYERLPLEDEQGEEG-MQV-------QQQQQQQQQQQSQGLGEQVSM--PMYNLPPNL
gm048588_Glyma1 NATYERLPLEDDQGEEE-MQVQQQQQQQQQQQQQQQQQQSQGLGEQVSM--PMYNLPPNL
                ********:*::* :*  :*:       ::*::::::::* . *:: **  ****:***:

AT3G55560.1     IPNGHQMAQHDVYWGGPPPRAPPSY
gm031763_Glyma1 LHNGQNMP-HDVLWGA-PPRPPPSF
gm048588_Glyma1 LHNGQNMP-HDVFWGA-PPRPPPSF
                : **::*. *** **. ***.***:
BoxShade v3.31 C (beta, 970507) Output
AT3G55560.1     M A N P W W V G N V A I G G V E S P V T S S A P S L H H R N S N N N N - - - - P P T M T R S D P R L D H D F T T N N S G
gm031763_Glyma1    M A N R W W T G N V G M I R E Q E L M - - - - - - - - - E N S N N N N - - - - - A T T T P T N - - - - - - - S S N S N T
gm048588_Glyma1    M A N R W W A G N V G M I R E Q E L M - - - - - - - - - E N S N N N N N N N N A T T T T P T N - - - - - - - S S N S N T
 
AT3G55560.1     S P N T Q T Q S Q E E Q N S R D - - - - - - - E Q P A V E P G S G S G S T G R R P R G R P P G S K N K P K S P V V V T K
gm031763_Glyma1    N A - - N T N T T E E E V S R D N G E D L Q N Q N L G S H E G S E P G S S G R R P R G R P P G S K N K P K P P I V I T K
gm048588_Glyma1    N A N T N T N T T E E E V S R D N G E D - Q N Q N L G S H E G S E P G S S G R R P R G R P A G S K N K P K P P I V I T K
 
AT3G55560.1     E S P N S L Q S H V L E I A T G A D V A E S L N A F A R R R G R G V S V L S G S G L V T N V T L R Q P A A S G G V V S L
gm031763_Glyma1    E S P N A L R S H V L E I T S G S D V A E S I A A F A N R R H R G V S V L S G S G I V A N V T L R Q P A A P A G V I T L
gm048588_Glyma1    E S P N A L R S H V L E I A S G S D V A E S I A A F A N R R H R G V S V L S G S G I V A N V T L R Q P A A P A G V I T L
 
AT3G55560.1     R G Q F E I L S M C G A F L P T S G S P A A A A G L T I Y L A G A Q G Q V V G G G V A G P L I A S G P V I V I A A T F C
gm031763_Glyma1    H G R F E I L S L S G A F L P - S P S P P G A T G L T V Y L A G G Q G Q V V G G T V A G S L V A S G P V M V I A A T F A
gm048588_Glyma1    H G R F E I L S L S G A F L P - S P S P S G A T G L T V Y L A G G Q G Q V V G G N V A G S L V A S G P V M V I A A T F A
 
AT3G55560.1     N A T Y E R L P I E E E Q Q Q E Q P L Q L - - - - E D G K K Q K E E N D D N E S G N N G N E G S M Q P P M Y N M P P N F
gm031763_Glyma1    N A T Y E R L P L E D E Q G E E G - M Q V - - - - - - - Q Q Q Q Q Q Q Q Q Q Q S Q G L G E Q V S M - - P M Y N L P P N L
gm048588_Glyma1    N A T Y E R L P L E D D Q G E E E - M Q V Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q Q S Q G L G E Q V S M - - P M Y N L P P N L
 
AT3G55560.1     I P N G H Q M A Q H D V Y W G G P P P R A P P S Y
gm031763_Glyma1    L H N G Q N M P - H D V L W G A - P P R P P P S F
gm048588_Glyma1    L H N G Q N M P - H D V F W G A - P P R P P P S F
 
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