fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G55730.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm039149 not found in 337aa AT3G55730.1 1st_1st 0.412921348 Ia
Pt033770 not found in 404aa AT3G55730.1 1st_1st 0.439606741 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G55730.1     ---MEGETHQSEPLPLASGDSDEGISAAIEAELAELAAGDSSGGGGCGGGGGGIR--SKV
gm039149_Glyma1 --MTEEDRSAQ-------ETVHNGVAS------TEL--------GGEEMDIAEVTAAGRV
pt033770_POPTR_ MRLTEGERENQMDSPTGGDGGDGGAES------GEL--------GGGSGGSGGTN--GKV
                    * :   .          . *  :       **        **   . .     .:*

AT3G55730.1     KGPWSTEEDAVLTKLVRKLGPRNWSLIARGIPGRSGKSCRLRWCNQLDPCLKRKPFSDEE
gm039149_Glyma1 KGPWSPEEDALLSRLVAQFGARNWSMIARGVPGRSGKSCRLRWCNQLDPCVKRKPFTEEE
pt033770_POPTR_ KGPWSPEEDAVLSQLVSKFGARNWSLIARGIPGRSGKSCRLRWCNQLDPCLKRKPFTDEE
                *****.****:*::** ::*.****:****:*******************:*****::**

AT3G55730.1     DRMIISAHAVHGNKWAVIAKLLTGRTDNAIKNHWNSTLRRKYADLWNNGQWMANSVTTAS
gm039149_Glyma1 DSIIVSAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLKRRCMEM---GRYVP---AHAD
pt033770_POPTR_ DRIIIAAHAKHGNKWAAIARLLPGRTDNSIKNHWNSTLRRRWADL---VRLKP---GTSD
                * :*::*** ******.**:**.*****:*********:*:  ::    :  .     :.

AT3G55730.1     VKNENVD--ETTNPPSSKQQLPQGDINSSPPKPPQVSDVVMEE--AANEPQEPQEQQEQA
gm039149_Glyma1 VMEDGTGSFDKTK-ASSEETMSIGDINSK--NPAEVRNVMMDN-----ENKPPTKDDAKV
pt033770_POPTR_ VMEDGSN--ERTR-ASSEETLSVCDVNSS--LPLEVRDVTMDDQPSQHEDKAQTDNIPQT
                * ::. .  : *. .**:: :.  *:**.   * :* :* *::     * :   .:  :.

AT3G55730.1     PPVVSNVPTENN----VFRPVARVGAFSIYNPTSQKN-GYRDYNIVPCEGPLIQAAKPDS
gm039149_Glyma1 EE-----------HPTLHRPVARVSAFSVYNTPGRSTMGS-CSKMFPRQSPLIQSPKPDV
pt033770_POPTR_ NEV--NFASEPNGNPTLPRPVARVSAFKVYNPLNDPKLGSGLTRTIPTHGCLVQTPKPDS
                                : ******.**.:**. .  . *    . .* .. *:*:.*** 

AT3G55730.1     LAGKFLQSLCDEPQIPSKCGHGCSTLPAETKFSRNSVLGPEFVDYEEPSAVFNQELISIA
gm039149_Glyma1 GSCKLFDDIDCEPMVPSQCGHGCCTGDSRESHSHGSLLGPEFVDYLESPS-SSHAFISIA
pt033770_POPTR_ GSCKILEDVHCEPIVPSRCGYGCCATPS-GGHPPSTLLGPEFVEYEEPPPFSSQELISIA
                 : *:::.:  ** :**:**:**.:  :   .. .::******:* *...  .: :****

AT3G55730.1     TDLNNIAWIKSGLDNA---------------------VVREAEQSLKMDNYNYNDPRIKF
gm039149_Glyma1 TDLNNIAWIKSGLENC------------------------------------------KF
pt033770_POPTR_ TDLNNIAWIKSGLENSSTGIPSNAASYRMSQGTSVGSQMGMSEQNLRNGHMHFEEGRNKL
                *************:*.                                          *:

AT3G55730.1     TGMM--------PRQDFFCARS
gm039149_Glyma1 LNCILVTII-------------
pt033770_POPTR_ MSTMAGTISTQMPA--------
                 . :
BoxShade v3.31 C (beta, 970507) Output
AT3G55730.1     - - - M E G E T H Q S E P L P L A S G D S D E G I S A A I E A E L A E L A A G D S S G G G G C G G G G G G I R - - S K V
gm039149_Glyma1    - - M T E E D R S A Q - - - - - - - E T V H N G V A S - - - - - - T E L - - - - - - - - G G E E M D I A E V T A A G R V
pt033770_POPTR_    M R L T E G E R E N Q M D S P T G G D G G D G G A E S - - - - - - G E L - - - - - - - - G G G S G G S G G T N - - G K V
 
AT3G55730.1     K G P W S T E E D A V L T K L V R K L G P R N W S L I A R G I P G R S G K S C R L R W C N Q L D P C L K R K P F S D E E
gm039149_Glyma1    K G P W S P E E D A L L S R L V A Q F G A R N W S M I A R G V P G R S G K S C R L R W C N Q L D P C V K R K P F T E E E
pt033770_POPTR_    K G P W S P E E D A V L S Q L V S K F G A R N W S L I A R G I P G R S G K S C R L R W C N Q L D P C L K R K P F T D E E
 
AT3G55730.1     D R M I I S A H A V H G N K W A V I A K L L T G R T D N A I K N H W N S T L R R K Y A D L W N N G Q W M A N S V T T A S
gm039149_Glyma1    D S I I V S A H A I H G N K W A A I A R L L P G R T D N A I K N H W N S T L K R R C M E M - - - G R Y V P - - - A H A D
pt033770_POPTR_    D R I I I A A H A K H G N K W A A I A R L L P G R T D N S I K N H W N S T L R R R W A D L - - - V R L K P - - - G T S D
 
AT3G55730.1     V K N E N V D - - E T T N P P S S K Q Q L P Q G D I N S S P P K P P Q V S D V V M E E - - A A N E P Q E P Q E Q Q E Q A
gm039149_Glyma1    V M E D G T G S F D K T K - A S S E E T M S I G D I N S K - - N P A E V R N V M M D N - - - - - E N K P P T K D D A K V
pt033770_POPTR_    V M E D G S N - - E R T R - A S S E E T L S V C D V N S S - - L P L E V R D V T M D D Q P S Q H E D K A Q T D N I P Q T
 
AT3G55730.1     P P V V S N V P T E N N - - - - V F R P V A R V G A F S I Y N P T S Q K N - G Y R D Y N I V P C E G P L I Q A A K P D S
gm039149_Glyma1    E E - - - - - - - - - - - H P T L H R P V A R V S A F S V Y N T P G R S T M G S - C S K M F P R Q S P L I Q S P K P D V
pt033770_POPTR_    N E V - - N F A S E P N G N P T L P R P V A R V S A F K V Y N P L N D P K L G S G L T R T I P T H G C L V Q T P K P D S
 
AT3G55730.1     L A G K F L Q S L C D E P Q I P S K C G H G C S T L P A E T K F S R N S V L G P E F V D Y E E P S A V F N Q E L I S I A
gm039149_Glyma1    G S C K L F D D I D C E P M V P S Q C G H G C C T G D S R E S H S H G S L L G P E F V D Y L E S P S - S S H A F I S I A
pt033770_POPTR_    G S C K I L E D V H C E P I V P S R C G Y G C C A T P S - G G H P P S T L L G P E F V E Y E E P P P F S S Q E L I S I A
 
AT3G55730.1     T D L N N I A W I K S G L D N A - - - - - - - - - - - - - - - - - - - - - V V R E A E Q S L K M D N Y N Y N D P R I K F
gm039149_Glyma1    T D L N N I A W I K S G L E N C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K F
pt033770_POPTR_    T D L N N I A W I K S G L E N S S T G I P S N A A S Y R M S Q G T S V G S Q M G M S E Q N L R N G H M H F E E G R N K L
 
AT3G55730.1     T G M M - - - - - - - - P R Q D F F C A R S
gm039149_Glyma1    L N C I L V T I I - - - - - - - - - - - - -
pt033770_POPTR_    M S T M A G T I S T Q M P A - - - - - - - -
 
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