fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G55730.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp004092 not found in 433aa AT3G55730.1 1st_1st 0.286516853 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G55730.1     MEGETHQSEPLPLASGDSDEGISAAIEAELAELAAGDSSGGG---GCGGGGGGIRSKVKG
pp004092_Pp1s72 MD-------------------------------VSPEVSGGGTRLKGAAGGAGTDDRIKG
                *:                               .: : ****     ..**.*  .::**

AT3G55730.1     PWSTEEDAVLTKLVRKLGPRNWSLIARGIPGRSGKSCRLRWCNQLDPCLKRKPFSDEEDR
pp004092_Pp1s72 PWSPEEDVVLNRLVEKFGARNWSLIARGIPGRSGKSCRLRWCNQLNPGVKRKPFTEEEDR
                ***.***.**.:**.*:*.**************************:* :*****::****

AT3G55730.1     MIISAHAVHGNKWAVIAKLLTGRTDNAIKNHWNSTLRRKY-ADLWNNGQWMANSVTTASV
pp004092_Pp1s72 AIVAAHAIHGNKWASIARMLPGRTDNAIKNHWNSTLRRKHMGD--DRGRKEGSSDGSEKG
                 *::***:****** **::*.******************: .*  :.*:  ..*  : . 

AT3G55730.1     KNENVDETTNPPSSKQQLPQGD------------INSSPPK--PPQVS------DVVMEE
pp004092_Pp1s72 KEDGSDTERTPPGRDNDNDMGDDSGRDYDGDDFAVSSDTPHSWPPHTSEKTVAGEIIMDG
                *::. *   .**. .::   **            :.*..*:  **:.*      :::*: 

AT3G55730.1     AAN--EPQEPQEQQEQAPPVVSNVPTENNVFRPVARVGAFSIYNPTSQKNGYRDYNIVPC
pp004092_Pp1s72 RSHLRSNQLERDSQHDVPASASAKSPEGKPIRPVPRPSAFSWY----RKVG-ANMSFVEP
                 ::  . *  ::.*.:.*. .*  ..*.: :***.* .*** *    :* *  : .:*  

AT3G55730.1     EGPLIQ--------AAKPDSLAGKFLQSLCD--EPQIPSKCGHGC-----STLPAETKFS
pp004092_Pp1s72 GSPSVSLSSHGDGGALNPTTVS-SFMPPFWNWSMPEAPSNCGRGCCPPQPSGRPAETSIS
                 .* :.        * :* ::: .*: .: :   *: **:**:**     *  ****.:*

AT3G55730.1     -RNSVLGPEFVDYEEPSAVFNQELISIATDLNNIAWIK----------------------
pp004092_Pp1s72 PKGPLMGPDYVEFGEDG--FAAVAPTVATMQANFATLNYTSATSQLLSSAIHAAVAEIVV
                 :..::**::*:: * .  *     ::**   *:* ::                      

AT3G55730.1     ------------------------SGLDNAVVRE--AEQSLKMDNYNYNDPRIKFTGMMP
pp004092_Pp1s72 PMLQGQVKQVTESFLAVEKDCRSSSRLDMGLMREIVAQEISRYTSMRVPEPSSK------
                                        * ** .::**  *::  :  . .  :*  *      

AT3G55730.1     RQDFFCARS
pp004092_Pp1s72 ---------
BoxShade v3.31 C (beta, 970507) Output
AT3G55730.1     M E G E T H Q S E P L P L A S G D S D E G I S A A I E A E L A E L A A G D S S G G G - - - G C G G G G G G I R S K V K G
pp004092_Pp1s72    M D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V S P E V S G G G T R L K G A A G G A G T D D R I K G
 
AT3G55730.1     P W S T E E D A V L T K L V R K L G P R N W S L I A R G I P G R S G K S C R L R W C N Q L D P C L K R K P F S D E E D R
pp004092_Pp1s72    P W S P E E D V V L N R L V E K F G A R N W S L I A R G I P G R S G K S C R L R W C N Q L N P G V K R K P F T E E E D R
 
AT3G55730.1     M I I S A H A V H G N K W A V I A K L L T G R T D N A I K N H W N S T L R R K Y - A D L W N N G Q W M A N S V T T A S V
pp004092_Pp1s72    A I V A A H A I H G N K W A S I A R M L P G R T D N A I K N H W N S T L R R K H M G D - - D R G R K E G S S D G S E K G
 
AT3G55730.1     K N E N V D E T T N P P S S K Q Q L P Q G D - - - - - - - - - - - - I N S S P P K - - P P Q V S - - - - - - D V V M E E
pp004092_Pp1s72    K E D G S D T E R T P P G R D N D N D M G D D S G R D Y D G D D F A V S S D T P H S W P P H T S E K T V A G E I I M D G
 
AT3G55730.1     A A N - - E P Q E P Q E Q Q E Q A P P V V S N V P T E N N V F R P V A R V G A F S I Y N P T S Q K N G Y R D Y N I V P C
pp004092_Pp1s72    R S H L R S N Q L E R D S Q H D V P A S A S A K S P E G K P I R P V P R P S A F S W Y - - - - R K V G - A N M S F V E P
 
AT3G55730.1     E G P L I Q - - - - - - - - A A K P D S L A G K F L Q S L C D - - E P Q I P S K C G H G C - - - - - S T L P A E T K F S
pp004092_Pp1s72    G S P S V S L S S H G D G G A L N P T T V S - S F M P P F W N W S M P E A P S N C G R G C C P P Q P S G R P A E T S I S
 
AT3G55730.1     - R N S V L G P E F V D Y E E P S A V F N Q E L I S I A T D L N N I A W I K - - - - - - - - - - - - - - - - - - - - - -
pp004092_Pp1s72    P K G P L M G P D Y V E F G E D G - - F A A V A P T V A T M Q A N F A T L N Y T S A T S Q L L S S A I H A A V A E I V V
 
AT3G55730.1     - - - - - - - - - - - - - - - - - - - - - - - - S G L D N A V V R E - - A E Q S L K M D N Y N Y N D P R I K F T G M M P
pp004092_Pp1s72    P M L Q G Q V K Q V T E S F L A V E K D C R S S S R L D M G L M R E I V A Q E I S R Y T S M R V P E P S S K - - - - - -
 
AT3G55730.1     R Q D F F C A R S
pp004092_Pp1s72    - - - - - - - - -
 
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