fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G55730.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb026117 not found in 439aa AT3G55730.1 1st_1st 0.346910112 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G55730.1     ------------------------------------MEGETH-------QSEP---LPLA
Sb026117_Sorbi1 HRTMSAAETAVSPAPQPPSDPNAAANADAAHSNSFSMADEAQTLTEALLQPQPNHMSPPP
                                                    * .*::       *.:*    * .

AT3G55730.1     SGDSDEGISAAIEAELAELAAGDSSGGGGCGGGGGG-IRSKVKGPWSTEEDAVLTKLVRK
Sb026117_Sorbi1 SGEEDDGVTAS-----GAPVGGDAAASAAAAAAANATMEERVRGPWSPEEDTVLSNLVEK
                **:.*:*::*:     .  ..**::........... :..:*:****.***:**::**.*

AT3G55730.1     LGPRNWSLIARGIPGRSGKSCRLRWCNQLDPCLKRKPFSDEEDRMIISAHAVHGNKWAVI
Sb026117_Sorbi1 LGARNWTLIARGIPGRSGKSCRLRWCNQLDPQVKRKPFTEEEDRIIMAAHAVHGNKWACI
                **.***:************************ :*****::****:*::********** *

AT3G55730.1     AKLLTGRTDNAIKNHWNSTLRRKYADLWNNGQWMANSVTTASV--KNENVDETTNPPSSK
Sb026117_Sorbi1 AKLLDGRTDNAIKNHWNSTLRRRYC---NDGRCKHGGSVQRSILEVSRAVSEEPWPSKDL
                **** *****************:*.   *:*:   .. .  *:   .. *.* . *... 

AT3G55730.1     QQLPQGDINSSPPKP-PQVSDVVMEEAANEPQEPQEQQEQAPPVVSNVPTENNVFRPVAR
Sb026117_Sorbi1 SSFNAMDVSDAPVQTVPETS----AGAWHITDQCSMTQGVDPPYLS---------RPAAK
                ..:   *:..:* :. *:.*      * : .:: .  *   ** :*         **.*:

AT3G55730.1     VGAFSIYN-----PTSQKNGYRDYNIVPCEGPLIQAAK------PDSLAGKFLQSLCDEP
Sb026117_Sorbi1 IGAFRPYNLGHTEPTQQE--------IPSS--VVKSDSTHKVLTPESEVFKFVDPICFSA
                :***  **     **.*:        :*..  :::: .      *:* . **::.:* ..

AT3G55730.1     QIPSKCGHGCSTLPAETKFSRNSVLGPEFVDYEEPSAVFNQELISIATDLNNIAWIKSGL
Sb026117_Sorbi1 EVPSKCGHGCCG--AHKQPRKNSLLGPEFNEFEDHPPILNTSFASLVSEISSIAWMRSGM
                ::********.   *..:  :**:***** ::*: ..::* .: *:.:::..***::**:

AT3G55730.1     DNAVVREAEQSLKMDNYNYNDPRIKFTGMMPRQDFFCARS
Sb026117_Sorbi1 QSS-----------------DASTLFQSVPPT--------
                :.:                 *.   * .: *
BoxShade v3.31 C (beta, 970507) Output
AT3G55730.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E G E T H - - - - - - - Q S E P - - - L P L A
Sb026117_Sorbi1    H R T M S A A E T A V S P A P Q P P S D P N A A A N A D A A H S N S F S M A D E A Q T L T E A L L Q P Q P N H M S P P P
 
AT3G55730.1     S G D S D E G I S A A I E A E L A E L A A G D S S G G G G C G G G G G G - I R S K V K G P W S T E E D A V L T K L V R K
Sb026117_Sorbi1    S G E E D D G V T A S - - - - - G A P V G G D A A A S A A A A A A A N A T M E E R V R G P W S P E E D T V L S N L V E K
 
AT3G55730.1     L G P R N W S L I A R G I P G R S G K S C R L R W C N Q L D P C L K R K P F S D E E D R M I I S A H A V H G N K W A V I
Sb026117_Sorbi1    L G A R N W T L I A R G I P G R S G K S C R L R W C N Q L D P Q V K R K P F T E E E D R I I M A A H A V H G N K W A C I
 
AT3G55730.1     A K L L T G R T D N A I K N H W N S T L R R K Y A D L W N N G Q W M A N S V T T A S V - - K N E N V D E T T N P P S S K
Sb026117_Sorbi1    A K L L D G R T D N A I K N H W N S T L R R R Y C - - - N D G R C K H G G S V Q R S I L E V S R A V S E E P W P S K D L
 
AT3G55730.1     Q Q L P Q G D I N S S P P K P - P Q V S D V V M E E A A N E P Q E P Q E Q Q E Q A P P V V S N V P T E N N V F R P V A R
Sb026117_Sorbi1    S S F N A M D V S D A P V Q T V P E T S - - - - A G A W H I T D Q C S M T Q G V D P P Y L S - - - - - - - - - R P A A K
 
AT3G55730.1     V G A F S I Y N - - - - - P T S Q K N G Y R D Y N I V P C E G P L I Q A A K - - - - - - P D S L A G K F L Q S L C D E P
Sb026117_Sorbi1    I G A F R P Y N L G H T E P T Q Q E - - - - - - - - I P S S - - V V K S D S T H K V L T P E S E V F K F V D P I C F S A
 
AT3G55730.1     Q I P S K C G H G C S T L P A E T K F S R N S V L G P E F V D Y E E P S A V F N Q E L I S I A T D L N N I A W I K S G L
Sb026117_Sorbi1    E V P S K C G H G C C G - - A H K Q P R K N S L L G P E F N E F E D H P P I L N T S F A S L V S E I S S I A W M R S G M
 
AT3G55730.1     D N A V V R E A E Q S L K M D N Y N Y N D P R I K F T G M M P R Q D F F C A R S
Sb026117_Sorbi1    Q S S - - - - - - - - - - - - - - - - - D A S T L F Q S V P P T - - - - - - - -
 
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