fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G55730.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm039149 not found in 337aa AT3G55730.1 1st_1st 0.412921348 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G55730.1     -MEGETHQSEPLPLASGDSDEGISAAIEAELAELAAGDSSGGGGCGGGGGGIRSKVKGPW
gm039149_Glyma1 MTEEDRSAQETVHNGVASTELG---GEEMDIAEVTAA----------------GRVKGPW
                  * :   .*.:  . ..:: *   . * ::**::*.                .:*****

AT3G55730.1     STEEDAVLTKLVRKLGPRNWSLIARGIPGRSGKSCRLRWCNQLDPCLKRKPFSDEEDRMI
gm039149_Glyma1 SPEEDALLSRLVAQFGARNWSMIARGVPGRSGKSCRLRWCNQLDPCVKRKPFTEEEDSII
                *.****:*::** ::*.****:****:*******************:*****::*** :*

AT3G55730.1     ISAHAVHGNKWAVIAKLLTGRTDNAIKNHWNSTLRRKYADLWNNGQWMANSVTTASVKNE
gm039149_Glyma1 VSAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLKRRCMEM---GRYVPAHADVMEDGTG
                :****:******.**:**.***************:*:  ::   *:::.  . . .  . 

AT3G55730.1     NVDETTNPPSSKQQLPQGDINSSPPKPPQVSDVVMEEAANEPQEPQEQQEQAPPVVSNVP
gm039149_Glyma1 SFDKTK--ASSEETMSIGDINSK--NPAEVRNVMMDNENKPPTKDDAKVEEHP-------
                ..*:*.  .**:: :. *****.  :*.:* :*:*::  : * : : : *: *       

AT3G55730.1     TENNVFRPVARVGAFSIYNPTSQKNGYRDYNIVPCEGPLIQAAKPDSLAGKFLQSLCDEP
gm039149_Glyma1 ---TLHRPVARVSAFSVYNTPGRSTMGSCSKMFPRQSPLIQSPKPDVGSCKLFDDIDCEP
                   .:.******.***:**...:..     ::.* :.****:.***  : *:::.:  **

AT3G55730.1     QIPSKCGHGCSTLPAETKFSRNSVLGPEFVDY-EEPSAVFNQELISIATDLNNIAWIKSG
gm039149_Glyma1 MVPSQCGHGCCTGDSRESHSHGSLLGPEFVDYLESPSS--SHAFISIATDLNNIAWIKSG
                 :**:*****.*  :. ..*:.*:******** *.**:  .: :****************

AT3G55730.1     LDNAVVREAEQSLKMDNYNYNDPRIKFTGMMPRQDFFCARS---
gm039149_Glyma1 LENC---------------------KFLN--------CILVTII
                *:*.                     ** .        *
BoxShade v3.31 C (beta, 970507) Output
AT3G55730.1     - M E G E T H Q S E P L P L A S G D S D E G I S A A I E A E L A E L A A G D S S G G G G C G G G G G G I R S K V K G P W
gm039149_Glyma1    M T E E D R S A Q E T V H N G V A S T E L G - - - G E E M D I A E V T A A - - - - - - - - - - - - - - - - G R V K G P W
 
AT3G55730.1     S T E E D A V L T K L V R K L G P R N W S L I A R G I P G R S G K S C R L R W C N Q L D P C L K R K P F S D E E D R M I
gm039149_Glyma1    S P E E D A L L S R L V A Q F G A R N W S M I A R G V P G R S G K S C R L R W C N Q L D P C V K R K P F T E E E D S I I
 
AT3G55730.1     I S A H A V H G N K W A V I A K L L T G R T D N A I K N H W N S T L R R K Y A D L W N N G Q W M A N S V T T A S V K N E
gm039149_Glyma1    V S A H A I H G N K W A A I A R L L P G R T D N A I K N H W N S T L K R R C M E M - - - G R Y V P A H A D V M E D G T G
 
AT3G55730.1     N V D E T T N P P S S K Q Q L P Q G D I N S S P P K P P Q V S D V V M E E A A N E P Q E P Q E Q Q E Q A P P V V S N V P
gm039149_Glyma1    S F D K T K - - A S S E E T M S I G D I N S K - - N P A E V R N V M M D N E N K P P T K D D A K V E E H P - - - - - - -
 
AT3G55730.1     T E N N V F R P V A R V G A F S I Y N P T S Q K N G Y R D Y N I V P C E G P L I Q A A K P D S L A G K F L Q S L C D E P
gm039149_Glyma1    - - - T L H R P V A R V S A F S V Y N T P G R S T M G S C S K M F P R Q S P L I Q S P K P D V G S C K L F D D I D C E P
 
AT3G55730.1     Q I P S K C G H G C S T L P A E T K F S R N S V L G P E F V D Y - E E P S A V F N Q E L I S I A T D L N N I A W I K S G
gm039149_Glyma1    M V P S Q C G H G C C T G D S R E S H S H G S L L G P E F V D Y L E S P S S - - S H A F I S I A T D L N N I A W I K S G
 
AT3G55730.1     L D N A V V R E A E Q S L K M D N Y N Y N D P R I K F T G M M P R Q D F F C A R S - - -
gm039149_Glyma1    L E N C - - - - - - - - - - - - - - - - - - - - - K F L N - - - - - - - - C I L V T I I
 
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