fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G55770.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os012304 not found in 196aa AT2G39900.1 1st_not 0.804289544 II
Sb021836 not found in 376aa AT2G39900.1 1st_not 0.764075067 II
Gm031818 not found in 200aa AT3G55770.5 1st_not 0.855227882 II
Pt042160 not found in 189aa AT3G55770.5 1st_not 0.882037533 II
Pp016735 not found in 191aa AT3G55770.5 1st_not 0.680965147 II
Sm016034 not found in 282aa AT1G10200.1 1st_not 0.672922252 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G55770.1     -------------------------------------------------------MSFTG
Sm016034_Selmo1 ---AG--------------------PDRSIEQ--PGGSSSCSRMSS---------FSFAG
pt042160_POPTR_ -------------------------------------------------------MSFTG
Sb021836_Sorbi1 ARQSGRRARRCSFLIHPTPRARRPRPDRALSQISPGGHDPRERERERGGLAGDREKMFSG
gm031818_Glyma1 -------------------------------------------------------MSFIG
pp016735_Pp1s80 -------------------------------------------------------MAFSG
Os012304_Os03t0 --------------------------------------------------------MFSG
                                                                         * *

AT3G55770.1     TQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQL
Sm016034_Selmo1 TQQKCKACDKTVYLVDQLTADGVVYHKACFRCHHCKGTLKLSNYASLEGVLYCKPHFDQL
pt042160_POPTR_ TQQKCKACEKTVYPMELLSTDGVAYHKSCFKCFHCKGTLKLSNYSSMEGVLYCKPHFDQL
Sb021836_Sorbi1 TQQKCKVCTKTVYPMDQLSTDGVAFHRSCFKCQHCKSTLSLSNYSSFEGVPYCKAHFEQL
gm031818_Glyma1 TQQKCKACEKTVYPVDQLSADGTAYHKACFRCSHCKGTLKLSNYSSMEGVLYCKPHFEQL
pp016735_Pp1s80 TTQKCKACEKTVYLVEQLTADGVVYHKSCFRCNHCKGTLKLANYASLEGVLYCKPHFEQL
Os012304_Os03t0 TQQKCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSLGNYSSIEGVPYCKPHFEQL
                * ****.* **** :: *::**. :*::**:* ***. *.*..*:*:*** ***.**:**

AT3G55770.1     FKESGSFNKNF-----QSPAKSA-DKS--TPELTRTPSRVAGRFSGTQEKCATCSKTVYP
Sm016034_Selmo1 FKLTGSFDKSFESGLLHKPV---------GEEASKTPSKTSLLFSGTQEKCFACGKTVYP
pt042160_POPTR_ FKETGNFNKNF-----QSPAKSA-EKL--TPELTRSPSKAAGMFSGTQEKCATCGKTAYP
Sb021836_Sorbi1 FKETGSYNKSFQ---SQSPAKITPEKL--APELTRSPSKAARMFSGTQDKCATCGKTAYP
gm031818_Glyma1 FKESGSFSKNF-----QSPAKLA-DKT--THELTRSPSKAASMFSGTQEKCATCGKTAYP
pp016735_Pp1s80 LKVTGSFDKSFE----HKPSEGL-KKAEKGE--NKAPSKASLMFSGTQEKCIACSKTVYP
Os012304_Os03t0 FKETGSYNKSF-----QSPAKPASEKL--TPELTRSPSKAARMFSGTQEKCATCSKTAYP
                :* :*.:.*.*     :.*              .::**:.:  *****:** :*.**.**

AT3G55770.1     IEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSA
Sm016034_Selmo1 IEKVTVENTSYHKSCFKCSHGGCTISPSNYQAHEGRLYCRHHYAQLVKEKGDFSNLSKTP
pt042160_POPTR_ LEKVTVESQAYHKSCFKCSHGGCAITPSNYAALEGVLYCKHHFSQLFKEKGSYNHLIKCA
Sb021836_Sorbi1 LEKVTVEEKAYHKSCFKCSHGGCAITPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKCA
gm031818_Glyma1 LEKVTVEGQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHLTKSA
pp016735_Pp1s80 IEKTTVEGLPYHKQCFKCVHGGCTISPSNYAALEGRLYCKPHYSQLFKEKGNYSQLTKAP
Os012304_Os03t0 LEKVTVEGQAYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKCA
                :**.***  .***.**** ****.*:**** * ** ***: *::**.****.:.:* * .

AT3G55770.1     SIKRSA-AAAVAAGVPAAS--VPES-
Sm016034_Selmo1 G-KAAAK-------------------
pt042160_POPTR_ SMKRAA-----------AP--VPEA-
Sb021836_Sorbi1 SVKRAA------EAQPEQP--ASDSS
gm031818_Glyma1 SVKRAAAAAATATATTVAS--VPES-
pp016735_Pp1s80 ALKVAASQA------------ITES-
Os012304_Os03t0 SVKR-A------EAQPAPPPAAADSS
                . *  *
BoxShade v3.31 C (beta, 970507) Output
AT3G55770.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S F T G
Sm016034_Selmo1    - - - A G - - - - - - - - - - - - - - - - - - - - P D R S I E Q - - P G G S S S C S R M S S - - - - - - - - - F S F A G
pt042160_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S F T G
Sb021836_Sorbi1    A R Q S G R R A R R C S F L I H P T P R A R R P R P D R A L S Q I S P G G H D P R E R E R E R G G L A G D R E K M F S G
gm031818_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S F I G
pp016735_Pp1s80    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A F S G
Os012304_Os03t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M F S G
 
AT3G55770.1     T Q Q K C K A C E K T V Y A V E L L S A D G V G Y H K S C F K C T H C K S R L Q L S S Y S S M E G V L Y C K P H F E Q L
Sm016034_Selmo1    T Q Q K C K A C D K T V Y L V D Q L T A D G V V Y H K A C F R C H H C K G T L K L S N Y A S L E G V L Y C K P H F D Q L
pt042160_POPTR_    T Q Q K C K A C E K T V Y P M E L L S T D G V A Y H K S C F K C F H C K G T L K L S N Y S S M E G V L Y C K P H F D Q L
Sb021836_Sorbi1    T Q Q K C K V C T K T V Y P M D Q L S T D G V A F H R S C F K C Q H C K S T L S L S N Y S S F E G V P Y C K A H F E Q L
gm031818_Glyma1    T Q Q K C K A C E K T V Y P V D Q L S A D G T A Y H K A C F R C S H C K G T L K L S N Y S S M E G V L Y C K P H F E Q L
pp016735_Pp1s80    T T Q K C K A C E K T V Y L V E Q L T A D G V V Y H K S C F R C N H C K G T L K L A N Y A S L E G V L Y C K P H F E Q L
Os012304_Os03t0    T Q Q K C K V C T K T V Y P M D Q L S T D G V V F H R S C F K C Q H C K S T L S L G N Y S S I E G V P Y C K P H F E Q L
 
AT3G55770.1     F K E S G S F N K N F - - - - - Q S P A K S A - D K S - - T P E L T R T P S R V A G R F S G T Q E K C A T C S K T V Y P
Sm016034_Selmo1    F K L T G S F D K S F E S G L L H K P V - - - - - - - - - G E E A S K T P S K T S L L F S G T Q E K C F A C G K T V Y P
pt042160_POPTR_    F K E T G N F N K N F - - - - - Q S P A K S A - E K L - - T P E L T R S P S K A A G M F S G T Q E K C A T C G K T A Y P
Sb021836_Sorbi1    F K E T G S Y N K S F Q - - - S Q S P A K I T P E K L - - A P E L T R S P S K A A R M F S G T Q D K C A T C G K T A Y P
gm031818_Glyma1    F K E S G S F S K N F - - - - - Q S P A K L A - D K T - - T H E L T R S P S K A A S M F S G T Q E K C A T C G K T A Y P
pp016735_Pp1s80    L K V T G S F D K S F E - - - - H K P S E G L - K K A E K G E - - N K A P S K A S L M F S G T Q E K C I A C S K T V Y P
Os012304_Os03t0    F K E T G S Y N K S F - - - - - Q S P A K P A S E K L - - T P E L T R S P S K A A R M F S G T Q E K C A T C S K T A Y P
 
AT3G55770.1     I E K V T V E S Q T Y H K S C F K C S H G G C P I S P S N Y A A L E G I L Y C K H H F A Q L F K E K G S Y N H L I K S A
Sm016034_Selmo1    I E K V T V E N T S Y H K S C F K C S H G G C T I S P S N Y Q A H E G R L Y C R H H Y A Q L V K E K G D F S N L S K T P
pt042160_POPTR_    L E K V T V E S Q A Y H K S C F K C S H G G C A I T P S N Y A A L E G V L Y C K H H F S Q L F K E K G S Y N H L I K C A
Sb021836_Sorbi1    L E K V T V E E K A Y H K S C F K C S H G G C A I T P S N Y A A L E G I L Y C K H H F S Q L F K E K G S Y N H L I K C A
gm031818_Glyma1    L E K V T V E G Q A Y H K S C F K C S H G G C P I T P S N Y A A L E G I L Y C K H H F S Q L F K E K G S Y N H L T K S A
pp016735_Pp1s80    I E K T T V E G L P Y H K Q C F K C V H G G C T I S P S N Y A A L E G R L Y C K P H Y S Q L F K E K G N Y S Q L T K A P
Os012304_Os03t0    L E K V T V E G Q A Y H K S C F K C S H G G C A I S P S N Y A A L E G I L Y C K H H F S Q L F K E K G S Y N H L I K C A
 
AT3G55770.1     S I K R S A - A A A V A A G V P A A S - - V P E S -
Sm016034_Selmo1    G - K A A A K - - - - - - - - - - - - - - - - - - -
pt042160_POPTR_    S M K R A A - - - - - - - - - - - A P - - V P E A -
Sb021836_Sorbi1    S V K R A A - - - - - - E A Q P E Q P - - A S D S S
gm031818_Glyma1    S V K R A A A A A A T A T A T T V A S - - V P E S -
pp016735_Pp1s80    A L K V A A S Q A - - - - - - - - - - - - I T E S -
Os012304_Os03t0    S V K R - A - - - - - - E A Q P A P P P A A A D S S
 
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