fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G55770.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp016735 not found in 191aa AT3G55770.5 1st_not 0.680965147 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G55770.1     MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP
pp016735_Pp1s80 MAFSGTTQKCKACEKTVYLVEQLTADGVVYHKSCFRCNHCKGTLKLANYASLEGVLYCKP
                *:*:** *********** ** *:**** ******:*.***. *:*:.*:*:********

AT3G55770.1     HFEQLFKESGSFNKNFQ-SPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIE
pp016735_Pp1s80 HFEQLLKVTGSFDKSFEHKPSEGLKKAEKGENKAPSKASLMFSGTQEKCIACSKTVYPIE
                *****:* :***:*.*: .*::. .*:    .::**:.:  ******** :*********

AT3G55770.1     KVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI
pp016735_Pp1s80 KTTVEGLPYHKQCFKCVHGGCTISPSNYAALEGRLYCKPHYSQLFKEKGNYSQLTKAPAL
                *.***. .***.**** ****.*********** **** *::*******.*.:* *:.::

AT3G55770.1     KRSAAAAVAAGVPAASVPES
pp016735_Pp1s80 KVAASQAIT---------ES
                * :*: *::         **
BoxShade v3.31 C (beta, 970507) Output
AT3G55770.1     M S F T G T Q Q K C K A C E K T V Y A V E L L S A D G V G Y H K S C F K C T H C K S R L Q L S S Y S S M E G V L Y C K P
pp016735_Pp1s80    M A F S G T T Q K C K A C E K T V Y L V E Q L T A D G V V Y H K S C F R C N H C K G T L K L A N Y A S L E G V L Y C K P
 
AT3G55770.1     H F E Q L F K E S G S F N K N F Q - S P A K S A D K S T P E L T R T P S R V A G R F S G T Q E K C A T C S K T V Y P I E
pp016735_Pp1s80    H F E Q L L K V T G S F D K S F E H K P S E G L K K A E K G E N K A P S K A S L M F S G T Q E K C I A C S K T V Y P I E
 
AT3G55770.1     K V T V E S Q T Y H K S C F K C S H G G C P I S P S N Y A A L E G I L Y C K H H F A Q L F K E K G S Y N H L I K S A S I
pp016735_Pp1s80    K T T V E G L P Y H K Q C F K C V H G G C T I S P S N Y A A L E G R L Y C K P H Y S Q L F K E K G N Y S Q L T K A P A L
 
AT3G55770.1     K R S A A A A V A A G V P A A S V P E S
pp016735_Pp1s80    K V A A S Q A I T - - - - - - - - - E S
 
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