fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G55770.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp000231 not found in 191aa AT3G55770.5 not_not 0.680965147 III
Pp021241 not found in 215aa AT3G55770.5 not_not 0.616621983 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G55770.1     MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP
pp021241_Pp1s65 MALVVAQPKCKTCDKTVYLVDQLRADGVLYHKACFRCHHCKGTLKLGNYASLEGVLYCRP
pp000231_Pp1s13 MAFSGTQQKCKACDKTVYLVEQLTADGVVYHKSCFRCNHCKGTLKLASYASLEGVLYCKP
                *::  :* ***:*:**** *: * **** ***:**:* ***. *:*..*:*:******:*

AT3G55770.1     HFEQLFKESGSFNKNFQSPAK-SADKSTPEL-TRTPSRVAGRFSGTQEKCATCSKTVYPI
pp021241_Pp1s65 HFDQLLKTTGSFEKSFDQQASMKGQSGYERFQNKTPSKGSTQFVGTQEKCVACGKTVYPL
pp000231_Pp1s13 HFEQLLKLTGSFDKSFEHKPS-EGLKKLPEKGEKVPSKASLMFSGTQDKCIACSKTVYPI
                **:**:* :***:*.*:  .. .. .   .   :.**: :  * ***:** :*.*****:

AT3G55770.1     EKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS
pp021241_Pp1s65 EKTTVEDLPYHKSCFKCAHGSCTISVSSYASLEGRLYCKHHYSQLFKEKGNYSRLTKPPA
pp000231_Pp1s13 DKTTVEGLPYHKHCFKCVHGGCTISPSNYAALEGRLYCKPHYSQLFKEKGNYSQLTKVPA
                :*.***. .*** **** **.*.** *.**:*** **** *::*******.*.:* * .:

AT3G55770.1     IKRSAAAAV---AAGVPAASVPES-----------
pp021241_Pp1s65 MKPTTKNEGGRMSLHFESKQSQEQVGRYTADTIDQ
pp000231_Pp1s13 LKVAATNAS------VES-----------------
                :* ::          . :
BoxShade v3.31 C (beta, 970507) Output
AT3G55770.1     M S F T G T Q Q K C K A C E K T V Y A V E L L S A D G V G Y H K S C F K C T H C K S R L Q L S S Y S S M E G V L Y C K P
pp021241_Pp1s65    M A L V V A Q P K C K T C D K T V Y L V D Q L R A D G V L Y H K A C F R C H H C K G T L K L G N Y A S L E G V L Y C R P
pp000231_Pp1s13    M A F S G T Q Q K C K A C D K T V Y L V E Q L T A D G V V Y H K S C F R C N H C K G T L K L A S Y A S L E G V L Y C K P
 
AT3G55770.1     H F E Q L F K E S G S F N K N F Q S P A K - S A D K S T P E L - T R T P S R V A G R F S G T Q E K C A T C S K T V Y P I
pp021241_Pp1s65    H F D Q L L K T T G S F E K S F D Q Q A S M K G Q S G Y E R F Q N K T P S K G S T Q F V G T Q E K C V A C G K T V Y P L
pp000231_Pp1s13    H F E Q L L K L T G S F D K S F E H K P S - E G L K K L P E K G E K V P S K A S L M F S G T Q D K C I A C S K T V Y P I
 
AT3G55770.1     E K V T V E S Q T Y H K S C F K C S H G G C P I S P S N Y A A L E G I L Y C K H H F A Q L F K E K G S Y N H L I K S A S
pp021241_Pp1s65    E K T T V E D L P Y H K S C F K C A H G S C T I S V S S Y A S L E G R L Y C K H H Y S Q L F K E K G N Y S R L T K P P A
pp000231_Pp1s13    D K T T V E G L P Y H K H C F K C V H G G C T I S P S N Y A A L E G R L Y C K P H Y S Q L F K E K G N Y S Q L T K V P A
 
AT3G55770.1     I K R S A A A A V - - - A A G V P A A S V P E S - - - - - - - - - - -
pp021241_Pp1s65    M K P T T K N E G G R M S L H F E S K Q S Q E Q V G R Y T A D T I D Q
pp000231_Pp1s13    L K V A A T N A S - - - - - - V E S - - - - - - - - - - - - - - - - -
 
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