fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G55770.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt042160 not found in 189aa AT3G55770.5 1st_not 0.882037533 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G55770.1     MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP
pt042160_POPTR_ MSFTGTQQKCKACEKTVYPMELLSTDGVAYHKSCFKCFHCKGTLKLSNYSSMEGVLYCKP
                ******************.:****:***.******** ***. *:**.************

AT3G55770.1     HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK
pt042160_POPTR_ HFDQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEK
                **:*****:*.************:* ******:**:.** ***********.**.**:**

AT3G55770.1     VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK
pt042160_POPTR_ VTVESQAYHKSCFKCSHGGCAITPSNYAALEGVLYCKHHFSQLFKEKGSYNHLIKCASMK
                ******:*************.*:*********:*******:**************.**:*

AT3G55770.1     RSAAAAVAAGVPAASVPES
pt042160_POPTR_ RA----------AAPVPEA
                *:          **.***:
BoxShade v3.31 C (beta, 970507) Output
AT3G55770.1     M S F T G T Q Q K C K A C E K T V Y A V E L L S A D G V G Y H K S C F K C T H C K S R L Q L S S Y S S M E G V L Y C K P
pt042160_POPTR_    M S F T G T Q Q K C K A C E K T V Y P M E L L S T D G V A Y H K S C F K C F H C K G T L K L S N Y S S M E G V L Y C K P
 
AT3G55770.1     H F E Q L F K E S G S F N K N F Q S P A K S A D K S T P E L T R T P S R V A G R F S G T Q E K C A T C S K T V Y P I E K
pt042160_POPTR_    H F D Q L F K E T G N F N K N F Q S P A K S A E K L T P E L T R S P S K A A G M F S G T Q E K C A T C G K T A Y P L E K
 
AT3G55770.1     V T V E S Q T Y H K S C F K C S H G G C P I S P S N Y A A L E G I L Y C K H H F A Q L F K E K G S Y N H L I K S A S I K
pt042160_POPTR_    V T V E S Q A Y H K S C F K C S H G G C A I T P S N Y A A L E G V L Y C K H H F S Q L F K E K G S Y N H L I K C A S M K
 
AT3G55770.1     R S A A A A V A A G V P A A S V P E S
pt042160_POPTR_    R A - - - - - - - - - - A A P V P E A
 
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