fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G55770.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os012304 not found in 196aa AT2G39900.1 1st_not 0.804289544 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G55770.1     MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP
Os012304_Os03t0 -MFSGTQQKCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSLGNYSSIEGVPYCKP
                  *:*******.* ****.:: **:*** :*:***** **** *.*..***:*** ****

AT3G55770.1     HFEQLFKESGSFNKNFQSPAKSA-DKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIE
Os012304_Os03t0 HFEQLFKETGSYNKSFQSPAKPASEKLTPELTRSPSKAARMFSGTQEKCATCSKTAYPLE
                ********:**:**.******.* :* ******:**:.*  **************.**:*

AT3G55770.1     KVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI
Os012304_Os03t0 KVTVEGQAYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKCASV
                *****.*:*************.*******************:**************.**:

AT3G55770.1     KRSAAAAVAAGVPAASVPES
Os012304_Os03t0 KR--AEAQPAPPPAAADSS-
                **  * * .*  ***: ..
BoxShade v3.31 C (beta, 970507) Output
AT3G55770.1     M S F T G T Q Q K C K A C E K T V Y A V E L L S A D G V G Y H K S C F K C T H C K S R L Q L S S Y S S M E G V L Y C K P
Os012304_Os03t0    - M F S G T Q Q K C K V C T K T V Y P M D Q L S T D G V V F H R S C F K C Q H C K S T L S L G N Y S S I E G V P Y C K P
 
AT3G55770.1     H F E Q L F K E S G S F N K N F Q S P A K S A - D K S T P E L T R T P S R V A G R F S G T Q E K C A T C S K T V Y P I E
Os012304_Os03t0    H F E Q L F K E T G S Y N K S F Q S P A K P A S E K L T P E L T R S P S K A A R M F S G T Q E K C A T C S K T A Y P L E
 
AT3G55770.1     K V T V E S Q T Y H K S C F K C S H G G C P I S P S N Y A A L E G I L Y C K H H F A Q L F K E K G S Y N H L I K S A S I
Os012304_Os03t0    K V T V E G Q A Y H K S C F K C S H G G C A I S P S N Y A A L E G I L Y C K H H F S Q L F K E K G S Y N H L I K C A S V
 
AT3G55770.1     K R S A A A A V A A G V P A A S V P E S
Os012304_Os03t0    K R - - A E A Q P A P P P A A A D S S -
 
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