fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G55770.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb021836 not found in 376aa AT2G39900.1 1st_not 0.764075067 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G55770.1     -------------------------------------------------------MSFTG
Sb021836_Sorbi1 ARQSGRRARRCSFLIHPTPRARRPRPDRALSQISPGGHDPRERERERGGLAGDREKMFSG
                                                                         *:*

AT3G55770.1     TQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQL
Sb021836_Sorbi1 TQQKCKVCTKTVYPMDQLSTDGVAFHRSCFKCQHCKSTLSLSNYSSFEGVPYCKAHFEQL
                ******.* ****.:: **:***.:*:***** **** *.**.***:*** ***.*****

AT3G55770.1     FKESGSFNKNF--QSPAK-SADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVT
Sb021836_Sorbi1 FKETGSYNKSFQSQSPAKITPEKLAPELTRSPSKAARMFSGTQDKCATCGKTAYPLEKVT
                ***:**:**.*  ***** :.:* :*****:**:.*  *****:*****.**.**:****

AT3G55770.1     VESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRS
Sb021836_Sorbi1 VEEKAYHKSCFKCSHGGCAITPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKCASVKRA
                **.::*************.*:*****************:**************.**:**:

AT3G55770.1     AAAAVAAGVPAASVPES-
Sb021836_Sorbi1 AEAQ-----PEQPASDSS
                * *      *  ...:*
BoxShade v3.31 C (beta, 970507) Output
AT3G55770.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S F T G
Sb021836_Sorbi1    A R Q S G R R A R R C S F L I H P T P R A R R P R P D R A L S Q I S P G G H D P R E R E R E R G G L A G D R E K M F S G
 
AT3G55770.1     T Q Q K C K A C E K T V Y A V E L L S A D G V G Y H K S C F K C T H C K S R L Q L S S Y S S M E G V L Y C K P H F E Q L
Sb021836_Sorbi1    T Q Q K C K V C T K T V Y P M D Q L S T D G V A F H R S C F K C Q H C K S T L S L S N Y S S F E G V P Y C K A H F E Q L
 
AT3G55770.1     F K E S G S F N K N F - - Q S P A K - S A D K S T P E L T R T P S R V A G R F S G T Q E K C A T C S K T V Y P I E K V T
Sb021836_Sorbi1    F K E T G S Y N K S F Q S Q S P A K I T P E K L A P E L T R S P S K A A R M F S G T Q D K C A T C G K T A Y P L E K V T
 
AT3G55770.1     V E S Q T Y H K S C F K C S H G G C P I S P S N Y A A L E G I L Y C K H H F A Q L F K E K G S Y N H L I K S A S I K R S
Sb021836_Sorbi1    V E E K A Y H K S C F K C S H G G C A I T P S N Y A A L E G I L Y C K H H F S Q L F K E K G S Y N H L I K C A S V K R A
 
AT3G55770.1     A A A A V A A G V P A A S V P E S -
Sb021836_Sorbi1    A E A Q - - - - - P E Q P A S D S S
 
0