fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G55770.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm031818 not found in 200aa AT3G55770.5 1st_not 0.855227882 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G55770.1     MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP
gm031818_Glyma1 MSFIGTQQKCKACEKTVYPVDQLSADGTAYHKACFRCSHCKGTLKLSNYSSMEGVLYCKP
                *** **************.*: *****..***:**:*:***. *:**.************

AT3G55770.1     HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK
gm031818_Glyma1 HFEQLFKESGSFSKNFQSPAKLADKTTHELTRSPSKAASMFSGTQEKCATCGKTAYPLEK
                ************.******** ***:* ****:**:.*. ***********.**.**:**

AT3G55770.1     VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK
gm031818_Glyma1 VTVEGQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHLTKSASVK
                ****.*:***************:*****************:************ ****:*

AT3G55770.1     R-SAAAAVAAGVPAASVPES
gm031818_Glyma1 RAAAAAATATATTVASVPES
                * :****.*:....******
BoxShade v3.31 C (beta, 970507) Output
AT3G55770.1     M S F T G T Q Q K C K A C E K T V Y A V E L L S A D G V G Y H K S C F K C T H C K S R L Q L S S Y S S M E G V L Y C K P
gm031818_Glyma1    M S F I G T Q Q K C K A C E K T V Y P V D Q L S A D G T A Y H K A C F R C S H C K G T L K L S N Y S S M E G V L Y C K P
 
AT3G55770.1     H F E Q L F K E S G S F N K N F Q S P A K S A D K S T P E L T R T P S R V A G R F S G T Q E K C A T C S K T V Y P I E K
gm031818_Glyma1    H F E Q L F K E S G S F S K N F Q S P A K L A D K T T H E L T R S P S K A A S M F S G T Q E K C A T C G K T A Y P L E K
 
AT3G55770.1     V T V E S Q T Y H K S C F K C S H G G C P I S P S N Y A A L E G I L Y C K H H F A Q L F K E K G S Y N H L I K S A S I K
gm031818_Glyma1    V T V E G Q A Y H K S C F K C S H G G C P I T P S N Y A A L E G I L Y C K H H F S Q L F K E K G S Y N H L T K S A S V K
 
AT3G55770.1     R - S A A A A V A A G V P A A S V P E S
gm031818_Glyma1    R A A A A A A T A T A T T V A S V P E S
 
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